| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0274 |
|---|
| Symbol | |
|---|
| ID | 6263149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 293273 |
|---|
| End bp | 293797 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642610739 |
|---|
| Product | general secretion pathway protein H |
|---|
| Protein accession | YP_001875172 |
|---|
| Protein GI | 187250690 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.560285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAA GCAAATCTTT AAGCCTTATT CCCTCATGCA CCGCTCACTT CAGCAAACTT
CTGAACAATC GTGCATTTAC GCTCATTGAG CTTTTGGTTG TTGTCCTTAT CATCGGCATA
CTTGCCGCTA TAGCGCTTCC GATGTACACA AAAGCGGTGG ACAAATCTAA AGCTGTCGAA
GCTATTGGAA TTGTTAAAAA TTTTTCCGAT GCAAACCAAA GATATCTTTT GGAATACGGA
GTATGCGCAC CGTCAGCAGA TGATTTAGAT ATTGATTTAA ATATCGATAC AAACAAATAT
ACCGTAACTT ATAGTATTGC TGATCACTGC CGCTTTGAGA TAAAAAATAA AAAAAACGGT
TTATTAATAA TGGCATATGG AGGCTCTTAT GCGGCAGCAC AGTGCCCAAA CGGGGACTGT
GTCTATTGTA AAGTAAGCAA AAACTCAACT TATCTTATTT CCTTATGTAA AACATTCGGT
CCTTTAGCCA CTGAAGGAAC TTATTTGTAT TATAGAATCA GATAA
|
|---|
| Protein sequence | MNQSKSLSLI PSCTAHFSKL LNNRAFTLIE LLVVVLIIGI LAAIALPMYT KAVDKSKAVE
AIGIVKNFSD ANQRYLLEYG VCAPSADDLD IDLNIDTNKY TVTYSIADHC RFEIKNKKNG
LLIMAYGGSY AAAQCPNGDC VYCKVSKNST YLISLCKTFG PLATEGTYLY YRIR
|
|---|
| |