Gene Emin_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0234 
Symbol 
ID6264032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp253472 
End bp254707 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content41% 
IMG OID642610698 
Productdiaminopimelate aminotransferase 
Protein accessionYP_001875133 
Protein GI187250651 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00102405 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.710692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA AGGAAATTTT AAAAAAAATT GACGGTTCAA AACAATTTGT TATCGATATG 
CAAAAAGGTT TAACTGCTAT ACCGGCGCTT TCACCCACGT TGCCCGGTGG CGAAGGGGAA
TATGATAAAG CGGTTTATTT GGAAAGTGTT TTGAAGAAAA TGAAATTTGA CGAAGTTTAC
CGTTTGGACT GCCCGGACAA AAAAGCTAAA AACGGCGTAA GACCCAACAT TATAGCCAAG
TATTACGGCA AAGATAAAAC AAAAAACTTT TGGGTTATGG CGCACATGGA CATTGTGTCC
CCCGGCGATT TAAGCCTTTG GAAAACGGAC CCTTATAAAG CGGAAGTAAA GGGGGATTTA
ATTTACGGCC GCGGAACTGA AGATAACCAG CAAGGTCTTA TCTCAGGTTT GGTAGCCGTT
AAAGCTATGA TGGACCTTGG CATAAGGCCC GATATTAATT TTAGTTTTAT TTTTAACGCT
GACGAAGAAA CAGGCAGCGC GTACGGTATA GGACATATCG TAAAAAAGCA TTTTAAAATT
TTCGGTAAAA ATGACTGTGT TATGGTGCCG GACGGCGGCA ACAAGGAAGG CACTCAGGTT
GAAGTGGCTG AAAAATCTAT TTGCTGGCTT AAATTTAAGG TGTTCGGCAA GCAGTTCCAC
GCCTCAATGC CGGAAAGCGG AAATAATGCC CATAGAGCGG GTGCTAACTT AATAGTAGCG
CTTGATGAAG CTTTGCATAA AAAATTTAAT AAGAAAGACA AAATGTTCGC GCCTTCGGTA
AGCACGTTTG AGCCTACAAA AAAGGAGTCA AATGTTGACA GCATTAACAT TTTGCCCGGT
GAGGACGTTT TTTATTTTGA CTGCCGTATC CTGCCTGTTT ATAAAGTTGA ACAGGTTATG
AAAGAGGTTA ACGCCGTAGT TAAAAAAATC AGCCAGAAAT TTAAAACAAA AATTACCGTT
GAGGTAGTTC AAAATGAAAG CTCTATACCC ACTAACCCTA AGGCTGAAAT TGTTAAAGCC
ACTGTAAATG CCGTTAAACT TGTTTATAAA AACAACCCCA AAGTTGTAGG TATAGGCGGG
GGCACAGTGT CCGCGTTTTT AAGAAACAAA GGCGTTCCTT GTGTTGTATA CTCGAAGCTG
CTTGAAACGC TGCACAGCCC GAATGAATGT TCAAGTATTA AGAATACTTT GGGCGACGCT
AAAGTATTCG CTCATATGGC AATGACTTTA AAATAG
 
Protein sequence
MSIKEILKKI DGSKQFVIDM QKGLTAIPAL SPTLPGGEGE YDKAVYLESV LKKMKFDEVY 
RLDCPDKKAK NGVRPNIIAK YYGKDKTKNF WVMAHMDIVS PGDLSLWKTD PYKAEVKGDL
IYGRGTEDNQ QGLISGLVAV KAMMDLGIRP DINFSFIFNA DEETGSAYGI GHIVKKHFKI
FGKNDCVMVP DGGNKEGTQV EVAEKSICWL KFKVFGKQFH ASMPESGNNA HRAGANLIVA
LDEALHKKFN KKDKMFAPSV STFEPTKKES NVDSINILPG EDVFYFDCRI LPVYKVEQVM
KEVNAVVKKI SQKFKTKITV EVVQNESSIP TNPKAEIVKA TVNAVKLVYK NNPKVVGIGG
GTVSAFLRNK GVPCVVYSKL LETLHSPNEC SSIKNTLGDA KVFAHMAMTL K