Gene Emin_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0232 
Symbol 
ID6263063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp250761 
End bp252686 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content41% 
IMG OID642610696 
Productcell wall hydrolase/autolysin 
Protein accessionYP_001875131 
Protein GI187250649 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.416726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.560186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA ACTATTTTTT TGCATTCTTA TTGCTTATAT CGGCGGCGCT TTCATATGCG 
CAAGACGTCC CTGTGGCGGC CAACTTGCCG CTGAGGGAGA AAAACCCCGA AACGGTTTAC
CCGATTTCAG TTGAGTATCC TCATGAAAAT ATGTACATTC CGATGGGTAC AAAAGCAACT
TTTATTTTTG GAAACATAAG CAACCCCAAG GCGGCTCTTA CAATAAACAA TGTACCTGTT
CCCGTTTATA AAACAGGCGG ATTTTTAGCT TTTTTACCCA TCGAGGAAGG TAAGTTTACT
TTTAATATTG AAACAGACGA CGGCGTTGTA AAACATCAAG CAACCAGAAC CGTTAATGTA
GACGGAGTAA AAATAAAGGA ATTTAAAGAA GCCTCTTTTG AAATAAAAAC AATAAAACCG
CAAACGGATA TTTGGGCTGT ACCCGGCGAT AAAATAGAGC TTTCCGCCTT TGGAATGCCC
GGCTCTTCGG TAACCGCGGC GATTTCCGGT TTAAAAGAAG CAAAAAATAT TGAGCTTAAA
GAAGTTGAAT CCGGTTTTTA CCAAGCGTTT TATATTATTA CAGACAAAGA CCAAGCTAAA
GCCGCAAAAA TTACTTACAG AATATTCCAT GAGCCCACCG GCACAAAAAA CAGAGCTGTC
GCCCCGGGCA GGCTAAAAAT ATTGGAACCT AAAGATTTTG TAACTGCTGA AATAAAGGCC
CCAGGAAGCC GCATAAGAAA TCAAGCGGTA AAAAAAGGAA GCTTATATCC TTTTTATAAT
ATGTACGGTA ATATAGTAAT AGACGGTTTG TACGAAGGAA TGTACCGTGT ACGCTTAGGT
GAAAAACACA GCGGGTGGAT AGAGGAATCA AAAGTAAGGC CGGTAAGAAA AACACCTTCG
CTTAATAAAA TAGAAACCGT TACAACGGAA GATCTTACAA CAAAAACAAG AATTACCTTT
TACGGCAAAA ATATTGTACC CGTACTTACT GAAAGCGGGC CGACGTCATT TAACATGACT
TTCTTTTATA CCGATTACAA TATCCCTGTT ATTGAAGACC CTATAAGCAC TTTGGTTAAC
AATATAGTTT TTGAAATTAT TGATGACACT ACAATAAAAT TTAATTTAAA TTATGCGGAA
GGCCAAATCC TTTGGGGTTA TGATTACGCA TATGACGAAA AAGGCAACCT TGTTTTAGAG
CTTATGCATA AACCTTTTTT AAACCCGCAG CCGGGCAAAC CATTGGCAGG CGCTAAAATT
ATGCTTGACC CGGGCCATTC CCCCAGAAGG AAGCCCGACT ATGACGGCGC CATCGGCCCT
ACAGGCCTTT TGGAATACGA AGTTAATATG CAAACCGCCA AAGAGCTGGC CAGTCTTCTT
GCAAAAACGG GAGCGGAAGT TATTATGAGT AAAAACGAAA CTGAACAAAC TTCCCTGCAG
CAAAGAGCTG CGGCGGCTTT AAAAAGCGGA GCGCATATTT TTGTAAGCAT ACACCACAAC
GCTTTACCTG TAGGCGCCAA CCCGCTTTCA AAAGAAAGGG GATTTACAGT TTATTATTTC
CATGAACACA GCAAAAAACT TGCTGAGGAT ATAACAAAAG GTTTTGTTAA AAATGTAAAA
CTGCCCAATA TGGGCACCTG GCCCGGTGAT TTTTATGTTG TGCGCACACC CCAACTGCCC
GCTGTGCTGA CGGAAAACGC CTTTTTAATG TACCCCAACC AGGAAGAAAT GGTGCGAAAC
GACAAAACCC GCCAGGCTTT TGTTAAAGCT ATCTACGAAG GTATTTTGAA TTTTTATAAT
GTAAAAATTG ACGAGCCCGC CACCGCGGCC ACAAAGCCAA AGGTATACAG GCATAAAAAG
AAAATTACCA AAAACACGCA GGTTAAAAAA CCTATTATGG CAAAATCCGC CGCTCAAGCA
AAATAG
 
Protein sequence
MKRNYFFAFL LLISAALSYA QDVPVAANLP LREKNPETVY PISVEYPHEN MYIPMGTKAT 
FIFGNISNPK AALTINNVPV PVYKTGGFLA FLPIEEGKFT FNIETDDGVV KHQATRTVNV
DGVKIKEFKE ASFEIKTIKP QTDIWAVPGD KIELSAFGMP GSSVTAAISG LKEAKNIELK
EVESGFYQAF YIITDKDQAK AAKITYRIFH EPTGTKNRAV APGRLKILEP KDFVTAEIKA
PGSRIRNQAV KKGSLYPFYN MYGNIVIDGL YEGMYRVRLG EKHSGWIEES KVRPVRKTPS
LNKIETVTTE DLTTKTRITF YGKNIVPVLT ESGPTSFNMT FFYTDYNIPV IEDPISTLVN
NIVFEIIDDT TIKFNLNYAE GQILWGYDYA YDEKGNLVLE LMHKPFLNPQ PGKPLAGAKI
MLDPGHSPRR KPDYDGAIGP TGLLEYEVNM QTAKELASLL AKTGAEVIMS KNETEQTSLQ
QRAAAALKSG AHIFVSIHHN ALPVGANPLS KERGFTVYYF HEHSKKLAED ITKGFVKNVK
LPNMGTWPGD FYVVRTPQLP AVLTENAFLM YPNQEEMVRN DKTRQAFVKA IYEGILNFYN
VKIDEPATAA TKPKVYRHKK KITKNTQVKK PIMAKSAAQA K