Gene Emin_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0216 
Symbol 
ID6263013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp233362 
End bp233853 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content41% 
IMG OID642610679 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875115 
Protein GI187250633 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0379234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GATTTACGTT AATAGAGCTT TTAGTTGTTG TGCTTATTAT TGGAATACTT 
GCCGCCATAG CAATGCCGCA ATACACAAAA GCCGTAGAAA AGAGCAGAAC GTCAGAAATC
GCCATAAACA CTAAAGCTTT ATTTGAAGCG GAAAACAGAT ATTTTCTTGC AACAGGAACA
TACCCGTCCG ACCCCGCAAG CGAGCTTGAC ATTTCATTAC CGTCAAACTG CGCGACTGCT
TCAACCACAA GCGGAACAGT AATTTCTTAT GACTGCGGCA AGTTTGTTTA TATGTTTAAT
ACAAACAGCC CCCACGTTAC AGGCAGAAGG GTAGGCAGCT CTTACGAAGG CTACAGAATA
GCTTCTACCG AAGACGGCTT ACTTTGTTAT ATGTTTAGCG GCGTAAACAA TTTCAACAAA
CTCAAAGAGC TTTGCAAAAG TTTAGGCTAC AAATGCAAAG TATCAAGCGG AAGCACACTT
ACGGATTGTT AA
 
Protein sequence
MKKGFTLIEL LVVVLIIGIL AAIAMPQYTK AVEKSRTSEI AINTKALFEA ENRYFLATGT 
YPSDPASELD ISLPSNCATA STTSGTVISY DCGKFVYMFN TNSPHVTGRR VGSSYEGYRI
ASTEDGLLCY MFSGVNNFNK LKELCKSLGY KCKVSSGSTL TDC