Gene Emin_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0210 
Symbol 
ID6263069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp223841 
End bp224305 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content43% 
IMG OID642610673 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875109 
Protein GI187250627 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000103934 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.61486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAGG GATTTACATT AATAGAACTG CTTGTTGTGG TTTTAATAAT AGGTATTTTG 
GCGGCTATAG CGCTGCCCCA ATACCAAAAA GCCGTTATGA AAAGCCGCTA CACCCAGCTT
TTTATTATGG TTAAGGCGGT TACGGACGCA GAGGAAAGGT ATTATCTTGC CGAAGGCTCT
TATACAAACG ATGTTAACAA CCTTGATATT GAACTTCCTT CCAACGCCAA CTATTCTTAT
TACTTTGACA TACGCGGTGA CGGACACGCC GCTTTGGTAA TGACCAGCAA GGACGGGGCT
TTACAGTATG TATCTTATTT CGCCAAATCT ACAGCAAGAC CTTCAATAAA AGAATGCAGG
GCGCTTTCCA CCAACGAAAA GGCCATATCA GTATGCAAAT CGTTAACAGG TAAAAATACG
CCTGACGGCG CGGGCGGGAC AGGTTATCCG TCTTTTATTT TTTAA
 
Protein sequence
MRKGFTLIEL LVVVLIIGIL AAIALPQYQK AVMKSRYTQL FIMVKAVTDA EERYYLAEGS 
YTNDVNNLDI ELPSNANYSY YFDIRGDGHA ALVMTSKDGA LQYVSYFAKS TARPSIKECR
ALSTNEKAIS VCKSLTGKNT PDGAGGTGYP SFIF