Gene Emin_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0163 
Symbol 
ID6263105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp177733 
End bp179874 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content44% 
IMG OID642610627 
Product1A family penicillin-binding protein 
Protein accessionYP_001875065 
Protein GI187250583 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA TAAAAACTTT TTTAGAATTA GCCCGTTCAA AAGCAGCTGT TTATGTTATT 
TTGGGCGCGC TTTTTATTTC AATTATTATC CTCGCGTGTT TTGCCCGCTA TATTTTAAGC
GCTCTTCCCC CCGTTTATGA GATGGAGGAG TACACCCCCT CGCTTTCTAC AAAAGTTTAC
GATGTTAATG AAAAGCTGAT TCATGAATTT TCTATAGAAA AACGCAGTAT GGTACCTTTG
GAAGAAATCC CTGTAGATAT ACAGAACGGT GTTATCGCTA TGGAAGACAG GGCTTTTTTT
GAACACCCCG GATTCTCTAT AAAAGGCACC CTGCGCGCCG TGATTTATGA TTTATTTACA
GCCAGGGCCA AGCAGGGCGG CTCCACCTTA ACGCAGCAGC TTTCCAGAGG CGTCTTTTTA
AGCAAAGAAA AAAAGATTAT AAGAAAAATA AGAGAAATTA TTTTAGCCGT TCAAATAGAA
AACCGCTTTA GCAAGTATGA AATTTTGCAG CTTTATTTAA ATGAAATTTA CTTCGGTCGC
GGGGCTTACG GCATTAAAGC GGCCGCAAAA AAATATTTTA ATAAAGAACT GCAGGATTTG
TCGCTGGCGG AATCGGCCCT TTTAGTAGGC GTAATACCCG CGCCTGAACG CTACAACCCG
TTCTCCAGCC CGGACAGAGC GCTTGAAAGA AGAAGACTTG TTTTAAAAGT TATGCAGGAA
CAAGGTTTTA TTACAGAAGA AGAAGCCGCC TTAGCTATGG AAGAGCCTCT GCCAGAAAAA
GCGCCCGAAG AAAAAGATAA ACCCGGACAG TATTTTATTG AGCATATAAG AAGATATTTA
GAACCAAAGT ACGGCATGGA TGTGCTTTGG AAAGCTGGCC TTAGCATCTA CACCACTATT
GATATTGAAA AACAAACCGC TGCGGAAGAA CTTATGGAGA AAAAGCTTCA TGAGTATGAT
TTAAAAATAG CAAAAGGGCT TGGCATTGAT ATTCCTGAAT TTAGCGACGA AAACGTTGAA
ACTACGGAAG ACGGCGAGCC TGTTGAACCC ACAGAGCCGG ACCTGACCAA TTACCCAAGG
CTGCAGGGCA GCTTTATAGT GCGCGACGTT AAAACAGGCG CTGTACGCGT TTTAATAGGC
GGGCGCGATT ATTCCGAATC ACGTTTTAAC AGGGCTACAC AATCAAAAAG GCAGCCCGGT
TCGAGCTTTA AGCCTTTTGT GTGGATGGCG GCCTTACAAA AAAATTATAC CCCGGCCACT
TTAGTAAAAG ATTTGCCGAC ATTATTTTAT TTTGACGGCA AGAACTGGCG TACCTTTGAC
GAGGAAGAGG ACCAGTACTC TCTTTCTTTG GCGGGCCAGT CCTTTATTTC AAGCAAAAGT
TTTTCAGTTT GGGTGCCTCA AAATATGGGC GGGCGCTCTT CAGGCTGGGT AACTTTAAGA
AGCGCTTTGG AAAAATCTAA AAATCTTGTA GCCGTTAACT TAATTGACGC TATCGGCATA
GGCAATGTGA TAAGCGTTGC CAGAAAAGCG GGCATAAAAA GCAACTTGGC CCCAGTGCCG
GCGCTTGCTT TGGGCGTATC AGCCGTTACG CTTGAAGAAC TTTTAAGCGC AATGTCCACA
TTTGGCAATA ACGGCATTCA TACGGAAAAT TATTTTATAG AAAAAGTTGT TGACGCTAAC
GGACGTGTTT TAGAACAGCA TATACCTTAT GAGCAGGGCG CGTTTTCACA GCAGGATTCC
TATTTATTAA TTAATATGAT GAAAGGCGTT ACCGACAGAG GAACCGCCGG CGCCGCCAGA
ACATTAAAAA GACCTTTAGC CGCCAAAACA GGCACCAGCC AAAACCACCG CGACACCTGG
TTTGTAGGCA TGACGCCGCA AACAGCCGCC GCGGCCTGGA TGGGATATGA CGACGATACT
TCACAAAAAG ACGGGCGTTG GACGGGGGGC GGAAGTGTTG GGCCGTGGTG GACTGATATT
ATGGAAGTCA TTTTAAAAGA TGAAGAACCT TTAGACTTCC CCGTTCCGGA AGGTATTTCA
TTTGTTTATA TAAACCCCGT TACAGGCAAA CTGGCCCAAC CTACGGACAG AACAAAATTT
TTGGAAGCAT TCAAAAAAGG TACTGAACCA AAATCTTTCT AA
 
Protein sequence
MKFIKTFLEL ARSKAAVYVI LGALFISIII LACFARYILS ALPPVYEMEE YTPSLSTKVY 
DVNEKLIHEF SIEKRSMVPL EEIPVDIQNG VIAMEDRAFF EHPGFSIKGT LRAVIYDLFT
ARAKQGGSTL TQQLSRGVFL SKEKKIIRKI REIILAVQIE NRFSKYEILQ LYLNEIYFGR
GAYGIKAAAK KYFNKELQDL SLAESALLVG VIPAPERYNP FSSPDRALER RRLVLKVMQE
QGFITEEEAA LAMEEPLPEK APEEKDKPGQ YFIEHIRRYL EPKYGMDVLW KAGLSIYTTI
DIEKQTAAEE LMEKKLHEYD LKIAKGLGID IPEFSDENVE TTEDGEPVEP TEPDLTNYPR
LQGSFIVRDV KTGAVRVLIG GRDYSESRFN RATQSKRQPG SSFKPFVWMA ALQKNYTPAT
LVKDLPTLFY FDGKNWRTFD EEEDQYSLSL AGQSFISSKS FSVWVPQNMG GRSSGWVTLR
SALEKSKNLV AVNLIDAIGI GNVISVARKA GIKSNLAPVP ALALGVSAVT LEELLSAMST
FGNNGIHTEN YFIEKVVDAN GRVLEQHIPY EQGAFSQQDS YLLINMMKGV TDRGTAGAAR
TLKRPLAAKT GTSQNHRDTW FVGMTPQTAA AAWMGYDDDT SQKDGRWTGG GSVGPWWTDI
MEVILKDEEP LDFPVPEGIS FVYINPVTGK LAQPTDRTKF LEAFKKGTEP KSF