Gene Emin_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0159 
Symbol 
ID6262978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp170593 
End bp171480 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content40% 
IMG OID642610623 
Productintegrase family protein 
Protein accessionYP_001875061 
Protein GI187250579 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTA ACGCAAGCCT TATAAATAAG TTTATTTTAA GTTTGCAGAG TAAAAATTTT 
TCCCGGCATA CTCTGCGGGC TTACACTGCG GACTTAAAAG ATGTTGAAAA TTATATGGCT
GAGCATAATT TAACGGCGGC TGAATTTTTT ACTCACACAA AGCTTCGCGG CTACCTGGGA
GTAACAAGTG AAGGCGATTA TAAAAAAAAC ACTGTTCTTC GTAAAATTTC GGTAATGCGC
AGTTTCGCCA AATATTTATT AAAACATGAG GTTATAAAAA ATAACCCTTT TAAACTTTTG
CCGCTGCCTA AAAGAGAAAA ACTTTTGCCA AAATTTTTAA CGCAGGAAGA AACGGACAGG
CTTATTGACA CGGCTGCAAA CCAGGGCAAA TTGCCCGCAA GGGACAAAGC TTTGTTTGAG
CTTATTTATT CAAGCGGTTT AAGAAGAAGC GAAGTTACCG GCCTTAGCAT AAAGGATATA
GATTTAAATT TAGGCGTTGT GCGCGTTATG GGCAAAGGCT CTAAAGAGCG TCTTGTGCCT
ATAACTGATT TGGCTATTGA AGCATTAAAA GAATATCTGT CCACGCGCGG CGTTTATAAC
AGCGGGGATC CTTTATTTTT AAACAGACTT GGCGGGCGTT TAACCGGTGA CGGACTTGCT
TACTTAGTTA AAAATATTAC TATAAAAGCT AATTTGGCAA GAAAGGTAAC CGCGCACAGC
TTAAGGCATT CTTTCGCGAC CCATATGTTA AATAACGGCT GTGATTTAAG AAGCTTACAG
GAAATGCTTG GGCATAAAAG CCTGTCGGCC ACGCAGGTTT ATACGCATGT GTCTTTGGAC
AGGCTTAAAA AAATTTACGG GCAAACCCAT CCGAGATCTA AGGAGTAG
 
Protein sequence
MESNASLINK FILSLQSKNF SRHTLRAYTA DLKDVENYMA EHNLTAAEFF THTKLRGYLG 
VTSEGDYKKN TVLRKISVMR SFAKYLLKHE VIKNNPFKLL PLPKREKLLP KFLTQEETDR
LIDTAANQGK LPARDKALFE LIYSSGLRRS EVTGLSIKDI DLNLGVVRVM GKGSKERLVP
ITDLAIEALK EYLSTRGVYN SGDPLFLNRL GGRLTGDGLA YLVKNITIKA NLARKVTAHS
LRHSFATHML NNGCDLRSLQ EMLGHKSLSA TQVYTHVSLD RLKKIYGQTH PRSKE