Gene Emin_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0148 
Symbol 
ID6264011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp157015 
End bp157539 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content38% 
IMG OID642610612 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001875050 
Protein GI187250568 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA TGAAAAGAGG TTTTACCTTA ATAGAATTAT TGGTAGTTGT GGTTATCATA 
GGAATACTGG CTGCAATAGC ATATCCTATG TATGCAAAGG CTATTGAGCG TAACCGCTCT
ATAGAGGCTA TGGTTGTACT TAAAAGATTT AAGGATATGC AAAGCATTTC AAGCGCAGTT
TCTCCCGAAA AAGTTATAAG GAGTTTGAAT AAAGCCAAGT CGGAATTTGC AGATGCCGTT
GCCATAACAT CAAATACGGG CAATCTGTCC GCCTATCCGG ACGGACAGGT AAGAATTAAT
AATTACGACT ATATATTTTC TAACGAGCCA AACAGCCTTT TAGCGGACAA TATTATAGCT
ATAAAAAATA CAGGCAAGTT TAAAGGCTAC GCGTTGTTTA TCAAAAACGG TATTCACTAT
TGTATGGATA ATGAATCCAT AGGGGGCGAT CTTGCCTGTG AAGAAGTTTT TGGCGGCGAG
CCTGACGGAA CCCATGGCGG TTGGATTATT TATAAATTAC ATTAA
 
Protein sequence
MIKMKRGFTL IELLVVVVII GILAAIAYPM YAKAIERNRS IEAMVVLKRF KDMQSISSAV 
SPEKVIRSLN KAKSEFADAV AITSNTGNLS AYPDGQVRIN NYDYIFSNEP NSLLADNIIA
IKNTGKFKGY ALFIKNGIHY CMDNESIGGD LACEEVFGGE PDGTHGGWII YKLH