Gene Emin_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0123 
Symbol 
ID6263214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp132342 
End bp132878 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content34% 
IMG OID642610586 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_001875026 
Protein GI187250544 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.715825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000155175 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAATAC AAATTACAGC TAAAAATATT AAATTAACAC CGGCAATAAA AGATTTTGCA 
CAGACAAGAC TTGATAAGAT GGAAAAATAT GTTGACCAAG TCGTTTGGGC GCAGATTTTT
TTATCAGTAG ATAAAAAGAT TAACCAAAAA GCGCAGATAA TCGTTCATGT CGGGAATAAA
AATACAGTTG ATGCCACTGC CATCGAAAGC GACCTTTATA AAGCTATAGA CGCTGCCGCT
TTTAAAGCGG AAGCCCAGCT TAAAAAAATT AAAGAAAAAA CAAAATCCAG AAGAAGCAAA
AAAGAAGAAA TTGTTAATTT TATCGATCCT GTTATGTCCG TTCAAAACGA TGTAAGATTT
TCTGTAATCA AACAGGTTGA AGTAACTCCC ATGAACCCGG AAGACGCCGT TTATGAAATG
GAAAGACTTG GCTACACTTT TTGGATGTTT TTAGACGAAG ACTCAAAGCA AATTAATATT
ATTTTTAAAA GGCTTGACAG CACATACGGC CTTATTAAAC CGGTAAAAAA GAAATAA
 
Protein sequence
MEIQITAKNI KLTPAIKDFA QTRLDKMEKY VDQVVWAQIF LSVDKKINQK AQIIVHVGNK 
NTVDATAIES DLYKAIDAAA FKAEAQLKKI KEKTKSRRSK KEEIVNFIDP VMSVQNDVRF
SVIKQVEVTP MNPEDAVYEM ERLGYTFWMF LDEDSKQINI IFKRLDSTYG LIKPVKKK