Gene Emin_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0093 
Symbol 
ID6263696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp98122 
End bp98631 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content38% 
IMG OID642610554 
ProductTfp pilus assembly protein PilE-like protein 
Protein accessionYP_001874996 
Protein GI187250514 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4968] Tfp pilus assembly protein PilE 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0563183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG GCTTTACTTT GATAGAGCTT TTAGTTGTGG TTTTAATAAT AGGCATATTA 
GCCGCGATAG CTTTACCGCA ATATAATAAA GCTGTTGAAA AGAGCAGAGC TTCGGAAGCT
CTTTTAATTT TAAAGTCTTT GCATCAGGCT CAAAAAATAT ATTTCATGCA GACGGGGACG
TTTACTTCAA ATTTAGATAA CCTTGACATT GAAATATCAG GCGCGTCAGA TAAAAACATG
GGGTCGGTTG GTATAGTAGG CAAACAAACA AAATATTTTG TTTTTTACAC TAACTTTGAC
GCTAACGGAG CCACTGGCCT GGGAGCTAGA AGAATAGACG CCACCGGCGC TACCTTATAC
GCTTTTAATA TCGGGGAATC TTCGAAAGAC GATCTTTTCA GGTGCTGTTA TATGCAGGAA
AAATATAAAG ACGTTTGTAA TGTTATGGGG TTTAATACAA CCGCTTCCGC GTCATATTTT
TCAGGTTCAT TGGGTTGTTT TTACCAATAG
 
Protein sequence
MKNGFTLIEL LVVVLIIGIL AAIALPQYNK AVEKSRASEA LLILKSLHQA QKIYFMQTGT 
FTSNLDNLDI EISGASDKNM GSVGIVGKQT KYFVFYTNFD ANGATGLGAR RIDATGATLY
AFNIGESSKD DLFRCCYMQE KYKDVCNVMG FNTTASASYF SGSLGCFYQ