| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0059 |
|---|
| Symbol | |
|---|
| ID | 6263697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | - |
|---|
| Start bp | 65939 |
|---|
| End bp | 66394 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642610521 |
|---|
| Product | Tfp pilus assembly protein PilE-like protein |
|---|
| Protein accession | YP_001874963 |
|---|
| Protein GI | 187250481 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.230525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GTTTTACGCT TATTGAGCTT TTAGTGGTTG TGTTAATTAT AGGCATACTT
GCCGCCATAG CGTTGCCGCA ATACCAAAAA GCCGTGCTTA AAGCAAAAAC GAGAGAGGCT
CTTATAAATT TAAAAGCTAT AGGGGACGCG CAGGAACGCG TTTTTCTAGC CACGCGTGCA
TATACTACGG ATAAAGATTC TCTTGATATC GGCGTTCCGG CACAGTCAAA ATACTTTAGC
GATTATTCTT TAAGAGCTAC CTACGCCCAG GTACTCGGAA CTTACAACAG CACAAATTTT
TATCTTGCCT ATTATTACGG AAAGAATTAT GTTTATTGCG CTGCGGCCAC TTCAAATGAA
GAAGCTAAAA AAATATGCGT AATGCTTAGC GGTAAAAGCA CGCCCGATGC CATAAACCTA
GGCGAAACGG GATATAGCCA ATACCTCATG AACTAA
|
|---|
| Protein sequence | MKKGFTLIEL LVVVLIIGIL AAIALPQYQK AVLKAKTREA LINLKAIGDA QERVFLATRA
YTTDKDSLDI GVPAQSKYFS DYSLRATYAQ VLGTYNSTNF YLAYYYGKNY VYCAAATSNE
EAKKICVMLS GKSTPDAINL GETGYSQYLM N
|
|---|
| |