Gene Emin_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0052 
Symbol 
ID6263646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp56489 
End bp59089 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content42% 
IMG OID642610514 
Productpreprotein translocase, SecA subunit 
Protein accessionYP_001874956 
Protein GI187250474 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACAA CAGTAATTGA AAAAATTTTT GGAACAAAAA GCGAAAGAGA TTTAAAAAAA 
CTTAAACCTA TAATAGAAAA AATTAACTCC CTAGAATCCG AAATTTTAAA ACTTTCAGAT
GAAGAATTAA AACAAAAAAC CTTTTATTTT AAAGAACAGC TGGCGCAGGG GAAAACGCTT
GACGATATTT TGCCCGAATC TTTCGCCGTT GTGCGTGAGG CGGCCCGCCG CGTAATAGGC
CTTCGCCACT ATGACGTGCA GCTTTTAGGC GGTATGGTTC TGCATCAGGG TAAAATAGCT
GAAATGAGAA CCGGGGAAGG TAAAACCCTT GTGGCCACGC TGCCTTCTTA CTTAAACGCT
TTAACAGGCA AAGGCGTCCA CGTGGTTACG GTTAACGACT ATCTTGCCAA ACGTGACAGA
AACTGGATGG GCCCTATTCA TGAGTTTTTA GGCTTAAGCG TAGGTTACAT TAACCGTGAA
ATGGATAACG AAGGCCGCCA GGAAATGTAT AAAAAGGATA TCACCTACGT TACAAATAAC
GAGCTTGGCT TTGATTATTT GCGTGATAAT ATGGTGGTGC GTAAAGAAGA CAGAGTTTTA
AAAAAATTAA ATTATTGTAT AGTTGACGAA GTAGACTCCA TTTTAATTGA CGAAGCCAGA
ACCCCTCTTA TTATTTCGGG CCCGGCGGAA CAAAGCACGG ATAAGTATGA AGTGGTTAAC
CGCATTATCC CAAGTTTAAA AATAAGGAAA ATTACTGAAG ACGATGAAAT AAAAGCCAAA
TATTCAGGCG AAAATCTTTC CGCCGGTTAC GATGCCGTTA TCGATGAAAA AAACCATAAT
GCCACCTTAA CCGAAGACGG TATAGCCAAA GCTGAAAAGT TTTTAGGCGT GGCCAATCTT
TATAATGATG TTGAATCCGA ATGGGTGCAC CATATTAACC AGGCTTTGCG CGCGCACCAT
TTATATGAAA AAGATGTTGA TTACGTTGTA AAAGACGGCG AAGTTATTAT TGTTGACGAA
TTTACGGGCC GTTTAATGCC GGGCCGCCGC TGGTCGGATG GGCTTCACCA GGCGGTAGAA
GCTAAAGAAA GAATTAAAAT TAAAGAAGAA AACCAAACTT TAGCTACGAT TACATTCCAA
AACTTTTTTA AACTTTATTC AAAACTTTCC GGTATGACGG GTACGGCCAT GACTGAAGCG
GGAGAGTTTT GGCAAATTTA CAAACTTGAC GTTGTTGAAG TTCCGCCGAA CAGGCCTTCT
AAACGCGTTG ACGGGGCTGA CCTTGTTTAC CGCACCGAGC GTGAAAAGTA TAACGCTATA
GTTGCCGACA TTGAGACATT GTGGAAAAAG GGCGCTCCCG TTTTAGTGGG TACCCGCTCT
ATTGAAAAGT CTGAAAAAGT TTCCGCCATG CTTAGGTCAA AAGGCATTCC GCATAAAGTT
TTAAACGCCA AATACCACGA AATGGAAGCG CAAATTATCA GCCAGGCGGG CGCTAAAGGT
TCTGTTACCA TAGCTACAAA CATGGCGGGC CGCGGCACCG ATATCGTGCT TGGCGGCAAC
CCCGCCACAC CGCAGCAGCA GGCTGAAGTT GTTGAACTCG GCGGTCTTCA CATTTTAGGT
ACGGAAAGGC ACGAAAGCAG ACGTATTGAT AACCAGCTCC GCGGCCGCGC CGCCAGACAA
GGTGACCCGG GCTCAAGCCG TTTTTATATT TCTTTAGATG ACGAACTTAT GAGGCTTTTT
GCCAATACTT CACGTATTTC GGGCATTTTG GAAAGAATGG GTATGACGGA AGGACAGGTG
ATAGAGTCCC GCCTTATGAG CAGACAAATT GAAGGCGCCC AAAGAATGGT TGAAGGGCAT
AACTTTGATA TCCGTAAGCA TTTGCTTGAT TATGACAAGG TTATGAACCA GCAAAGAACC
GCCATTTACC ATTTACGCAA TAAAATTTTA GACGGTGAGA GCGTAAGCGA ACAAGTAATG
CAGATGATTG AGGAGGTTAT ACACGAAACT TTTGACAAAT ATTATAATGT AAAACATCCT
CAAAGCACTG ACTTTAATAC GCTTAATATA TTTTTACAAA GAGCGTTTAC CATAGACGCT
AATTTCAGCG GGGAGAGTAT TAAGGGCAAA TCAAAAGAAC AGATTGACGG GGAAACTTTT
GAAGCCGTTA AAAAAGCTTT TGAAGAGCGT TCAAAATATT TTAATGAACA GGGCGTTAAT
TTCAACGAAG TTGAAAGAAT GCTGCTTCTT CAAATTATAG ACCAGGCATG GAAACAGCAC
TTATATGAGC TTGACCAAAT GCAAAAAAGC GTCAGCTTAC GCGGTTACGC GCAAAAAGAT
CCTTTGATTG AGTACCAAAA AGAATCTTAT AACCTGTACC AAAACATGTT AAACAAAGTG
CGTGACGTTA TGGTTGAGTA TATTTTTCGC TTACAACTCC CTCCTAAAAG AAGAGTTTCC
CCTATCGGGA CGCCATCTTC CGAAGGCGGT GGAGAGACTT CCGGCGCGGA TACATATTCA
AACAAAAAAA TAGGACGTAA TGACCCTTGC CCCTGCGGCA GCGGTAAAAA ATATAAAAAG
TGCTGCGGTG CCGATTTATA A
 
Protein sequence
MITTVIEKIF GTKSERDLKK LKPIIEKINS LESEILKLSD EELKQKTFYF KEQLAQGKTL 
DDILPESFAV VREAARRVIG LRHYDVQLLG GMVLHQGKIA EMRTGEGKTL VATLPSYLNA
LTGKGVHVVT VNDYLAKRDR NWMGPIHEFL GLSVGYINRE MDNEGRQEMY KKDITYVTNN
ELGFDYLRDN MVVRKEDRVL KKLNYCIVDE VDSILIDEAR TPLIISGPAE QSTDKYEVVN
RIIPSLKIRK ITEDDEIKAK YSGENLSAGY DAVIDEKNHN ATLTEDGIAK AEKFLGVANL
YNDVESEWVH HINQALRAHH LYEKDVDYVV KDGEVIIVDE FTGRLMPGRR WSDGLHQAVE
AKERIKIKEE NQTLATITFQ NFFKLYSKLS GMTGTAMTEA GEFWQIYKLD VVEVPPNRPS
KRVDGADLVY RTEREKYNAI VADIETLWKK GAPVLVGTRS IEKSEKVSAM LRSKGIPHKV
LNAKYHEMEA QIISQAGAKG SVTIATNMAG RGTDIVLGGN PATPQQQAEV VELGGLHILG
TERHESRRID NQLRGRAARQ GDPGSSRFYI SLDDELMRLF ANTSRISGIL ERMGMTEGQV
IESRLMSRQI EGAQRMVEGH NFDIRKHLLD YDKVMNQQRT AIYHLRNKIL DGESVSEQVM
QMIEEVIHET FDKYYNVKHP QSTDFNTLNI FLQRAFTIDA NFSGESIKGK SKEQIDGETF
EAVKKAFEER SKYFNEQGVN FNEVERMLLL QIIDQAWKQH LYELDQMQKS VSLRGYAQKD
PLIEYQKESY NLYQNMLNKV RDVMVEYIFR LQLPPKRRVS PIGTPSSEGG GETSGADTYS
NKKIGRNDPC PCGSGKKYKK CCGADL