Gene Emin_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0038 
Symbol 
ID6264008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp41030 
End bp41806 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content42% 
IMG OID642610501 
Producthemolysin A 
Protein accessionYP_001874943 
Protein GI187250461 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones112 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA GTAACCCTAA AAAACCGCGT TTGGATATGG AGCTTATAGC CCAGGGATTT 
TTTAAATCCC GCACGCGCGC GCAGGCAAGC ATTATGGCGG GCGAAGTGCT TGTTAACGGC
ACCGTGGAAT ACGGCGCGGA CAGAAAAATA AAACCTGAGG ATATTATTAC CTTAAAAGAA
AAGTCCTGCC CTTACGTATC TCGCGGCGGA CTGAAATTAG AACACGCTTT AAAAGAATTT
AAAATTGAAG TTAACGGTAA AATCTGCGCC GATATCGGCG TAGCCACGGG CGGGTTTAGC
CATTGTTTTT TAAAACTTGG GGCAAAAAAA GTTTACGGCG TTGACGTGGG CAAAGGCCAG
CTGGCCAGTG AAGTGGCGGC TTATAAAAAC TTTATTTTCA AAAATGAAAC CAACGCCAGG
TTTATGTCGG CCGATATGTT TGATGATAAG TTTGAAGTAG CGGCTGTGGA TGTTTCTTTT
ATATCTTTAA AAATGATTTT AGAGCCGCTT TTAAAATGCA TGTCCGCCGA AGCGCATTTA
GCTGTTTTAA TTAAACCGCA ATTTGAGTTA ACCCCAAAAC AAGTGCCCGG CGGCATAGTA
AAAACAGAAG AGAACAGACA GCTTGCCATA AAAAGCGTGC GTGATTTTTT TAATGAAAAC
CTTGCCAAAA AATATAACGC CCAAAGTTTG GATTTAATTG AAAGCCCTAT TAAAGGCACT
CACGGAAATA TTGAATATTT GTGGCATATT AAAAAAACGC CGGGGCCTTC TTTTTAG
 
Protein sequence
MMTSNPKKPR LDMELIAQGF FKSRTRAQAS IMAGEVLVNG TVEYGADRKI KPEDIITLKE 
KSCPYVSRGG LKLEHALKEF KIEVNGKICA DIGVATGGFS HCFLKLGAKK VYGVDVGKGQ
LASEVAAYKN FIFKNETNAR FMSADMFDDK FEVAAVDVSF ISLKMILEPL LKCMSAEAHL
AVLIKPQFEL TPKQVPGGIV KTEENRQLAI KSVRDFFNEN LAKKYNAQSL DLIESPIKGT
HGNIEYLWHI KKTPGPSF