Gene Emin_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0006 
Symbol 
ID6263094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp6138 
End bp8660 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content44% 
IMG OID642610468 
ProductDNA gyrase, A subunit 
Protein accessionYP_001874911 
Protein GI187250429 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00000948225 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAGA AAGAAAATCA ATCTGTTGAT TTATTTGGAA ATATTAAATC GCGCGATATT 
GGCGAGGAGA TGAAAAGGTC TTATATTGAT TACGCTATGA GCGTTATCGT AGGCCGCGCG
TTGCCGGACG TGCGCGACGG GTTAAAACCC ATTCACCGCA GGCTTTTATA CGGCATGAAC
GAAATGGGAT TAAAATATAA CAAATCTTTT AAAAAATCCG CGCGTGTAGT CGGCGACGTA
ATGGGTAAAT ACCATCCCCA CGGCGATTCA GCTATTTATG ATTCGTTGGT TCGTTTGGCG
CAGGATTTTT CTTTAAGGGA CACTCTTGTA GACGGGCAGG GTAACTTCGG CTCGGTCGAC
GGCGATATGG CCGCCGCTAT GCGTTATACA GAAGTCCGCC TTGAAAGAAT TGCTGACGAA
ATGCTTAACG ATATTGATAA AAATACCGTT AAGTTTATGG ATAACTACGA CGGCTCCATG
CAGGAACCTT CTGTTCTTCC CGCAAAAATG CCAAACCTTC TTGTAAACGG TTCCTCAGGC
ATTGCGGTAG GTATGGCAAC AAATATTCCT ACACATAATT TAAGCGAAGT CTGCGACGCT
GTTATTGAAG TAATTAAAAA CCCCGGCGTA ACCACAAAAG AATTAATGAA TATTATCAAA
GGCCCGGATT TTCCGACGGG GGCTATAATT TGCGGACGCA AAGGTATTTT TGATTATTTT
GAAACGGGCA AAGGCTCCGT TAAAGTGCAG GCCAGGGCGG AAATTGAAGA AGGCGGCAGA
GGCGGCAGAA GCGCCATTGT AGTTACGGAA ATTCCTTACC AGGTTAACAA AACCAATTTA
ATTGAAGCGA TAGCGGGTTT GGTTAAAGAC AAAAAAGTTA CCGATATCGC CGATATACGT
GACGAAAGCG ACCGCCGGGG CATGCGCCTT GTTATTGAAG TAAAGCGCGA CGGCGACGCA
AGAGTTGTTT TAAACCACTT ATACAAACAC ACCCAGCTTC AAACCAGTTT TAGCGTAAAC
ATGCTTGCCA TTGTTGACGG CAGGCCGCGC ATACTGCCTA TTAAAGAAGT GATGAAGTGT
TATGTAAAAC ACAGAAAAGA AGTTGTTACC GCAAGAACAA GGTTTGATTT AAACAAAGCG
CAAAAACGCG AGCATATTTT GCAGGGCTTG CTTATAGCGA TTGCTAACTT AGATAAAGTT
ATCAAAATAA TCCGCGAAGC GCAAGATCCG ACGGAAGCCA AATTCGCTTT AATAAGAGAA
TTCGCATTAT CCGAACCGCA GTCCCAGGCT ATTTTGGATA TGAGGCTGCA CCAGTTAACG
CAGCTTTCCT CAGCCTCTAT AGAAAAAGAA CAAAAAGAAC TGCTTGCTTT AATAGCCGAA
CTTAAGGGTA TTTTAGAAGA TCCTCAAAAA GTTTTAGCTA TTATCGTAGA TGAGCTGAAA
GGCCTTAAAA AAGATTACGG TACCGAACGC AAAACGGAAA TAAGCAATAC TGAACTTTCC
GACATGACGA TGGAAGATCT TATTGAGGAA GAAGATGTTG TAATCACATT ATCTAACGAT
GGTTACGCAA AACGTATTCC TCTTGACACT TACCGCACGC AAAACCGCGG CGGAAAGGGC
GTTATCGGCG GTAAAACGAA AGAGGAAGAT TTTATTGAAC ATCTTTTCGT TACCTCCACG
CACGCTACCA TTCTTATGTT CACAACCAGG GGCAGAGTGT TTAGCTTACG CGCTTATGAA
ATACCGGAAG GAAACAGACT GTCGAAAGGC AAGGCCATTG TAAATCTTTT ACAGATTTCT
AATGAGGAAA AAATTACCTC AGCCGTGGCT ATTGAGGATT TTGACCCCAA AAACAGCGGC
GAAACCTACT TAACAATGTG TACGCGTTTC GGTTTAATTA AACGTGTTGA ACTGGGTGAT
TTCGCCAACA TACGTAAATC GGGCATCATT GCCATCGGTC TTGAAGACGG GGATGTTTTA
ACCTCGGTTC AAATGACCCA CGGCAAGAGC GATCTTATTA TCGCCACACG CGACGGCAAA
GCTATAAGGT TTGATGAAGA GCAAATCCGC GCTATGGGCC GCCAGGCCAA AGGCGTAAGA
GGCATCAGGC TCGGTAAAGA TGATATTGTG GTAGGCATGG AACACGCTTT AAAAGACGCT
CCCGGGCCGG ACGTATTATC CGTTTGTGAA AACGGCTACG GCAAACGCAC GGAATTTACG
GAATACCGCA AACAAAACCG CGGCGGAAGC GGGACAATCA CCATTAAAAC AACAGAACGC
AACGGTAAAG TAGTAGGCAT TAAACTTGTT GATGAATCTA AAGATTTAAT GGTTATTACG
GAAAACGGCA TGGCGGTAAG AATACGCTGT GAGGAAATCC GTTCCGTAGG CCGCAACGCT
CAAGGCGTAA GGCTTGTAAA GCTGGCGGAA TCTGACAAAA TCGCCCGCAT AGCGCCCGTT
ATTAAAGATA ATGACGAGGA AGCCTGCGGC GGTGAAGAAG CGGTTCCTAA AGAATTAATA
TAA
 
Protein sequence
MSEKENQSVD LFGNIKSRDI GEEMKRSYID YAMSVIVGRA LPDVRDGLKP IHRRLLYGMN 
EMGLKYNKSF KKSARVVGDV MGKYHPHGDS AIYDSLVRLA QDFSLRDTLV DGQGNFGSVD
GDMAAAMRYT EVRLERIADE MLNDIDKNTV KFMDNYDGSM QEPSVLPAKM PNLLVNGSSG
IAVGMATNIP THNLSEVCDA VIEVIKNPGV TTKELMNIIK GPDFPTGAII CGRKGIFDYF
ETGKGSVKVQ ARAEIEEGGR GGRSAIVVTE IPYQVNKTNL IEAIAGLVKD KKVTDIADIR
DESDRRGMRL VIEVKRDGDA RVVLNHLYKH TQLQTSFSVN MLAIVDGRPR ILPIKEVMKC
YVKHRKEVVT ARTRFDLNKA QKREHILQGL LIAIANLDKV IKIIREAQDP TEAKFALIRE
FALSEPQSQA ILDMRLHQLT QLSSASIEKE QKELLALIAE LKGILEDPQK VLAIIVDELK
GLKKDYGTER KTEISNTELS DMTMEDLIEE EDVVITLSND GYAKRIPLDT YRTQNRGGKG
VIGGKTKEED FIEHLFVTST HATILMFTTR GRVFSLRAYE IPEGNRLSKG KAIVNLLQIS
NEEKITSAVA IEDFDPKNSG ETYLTMCTRF GLIKRVELGD FANIRKSGII AIGLEDGDVL
TSVQMTHGKS DLIIATRDGK AIRFDEEQIR AMGRQAKGVR GIRLGKDDIV VGMEHALKDA
PGPDVLSVCE NGYGKRTEFT EYRKQNRGGS GTITIKTTER NGKVVGIKLV DESKDLMVIT
ENGMAVRIRC EEIRSVGRNA QGVRLVKLAE SDKIARIAPV IKDNDEEACG GEEAVPKELI