Gene Emin_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0005 
Symbol 
ID6263176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp3576 
End bp6053 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content41% 
IMG OID642610467 
ProductDNA gyrase, B subunit 
Protein accessionYP_001874910 
Protein GI187250428 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000146448 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGAAG AAGTCAAAGA AAAAGAACAA AAGAATTATG ATTCTTCTAA AATTCAGGTT 
TTAGAAGGTC TTGAAGCTGT TAGAAAGCGC CCCGCTATGT ATATCGGCTC AACAGGTTTA
CCGGGTTTAC ACCACTTGGT GTACGAGGTT GTTGATAACT CTGTTGATGA GATTTTAGCA
GGCGGAGCCA CAAAAATTTC AGTCACTATT AAAGATGATA TGACATGTTC CGTAGCCGAC
GACGGACGCG GTATTCCCGT TGACCCTATG GTTAACGCTA AAGACCCTAA ACTTAAAGGC
AAAAGCGCTT TAGAAGTAGT TATGACAGTG CTTCATGCGG GCGGTAAGTT TGATAGCGGA
GCTTATAAAG TTTCGGGCGG GTTACACGGT GTGGGTGTAT CTTGCGTAAA CGCTTTATCA
GAGTATTTAG AAGTAGTTGT TAATAAAGAC GGTAAACAAT ATTTTCAACG TTATCATAGA
GGCAAACCTG AAGAAAAAGT TAAAGAAATA GGAGCCGCTA AAGAAAAAGG CACAACCGTG
ACATTTAAAG CCGATACAGA AATCTTCGGC GAACTTTCTT TCTCGTATGA TACAATAGCC
AACAGACTTC GCGAACTCGC GTTCTTAAAT GCGGGTGTTA AAATTATTTT AACGGACGAA
CGCGGCGATG AGCCTAAAAC ACACACCTTC TTTTACGAAG GAGGCATTTC ACAGTTTGTT
AAATATATTA ACTCCAATAA AACAACTCTT CACGCGGAGC CTATTTACCT TACAAAAGAA
ATTAATAATA ATTACATTTC TTTCGCCATA CAATATAACG ACAGTTATTC CGAAAATATT
TATTCTTTCG TTAACAATAT TAACACTATT GAAGGCGGCA CCCATTTAAG CGGTTTTCGC
TCTTCTCTTA CAAGGGTAAT TAACGAATAT ATTAAAGATA ACGGCCTTCT TAAAAACAAA
GAAGTTAACG TCACCGGCGA TGATATGAGG GAAGGTTTAA CCGCGGTATT ATCAGTTAAA
ATCCCGCACC CCCAGTTTGA AGGGCAGACA AAAACCAAAT TAGGCAACAG TGAAATTGAA
GGTATCGTCC GCTCCATGGT TGGCGACGCT TTAACAACCT TCTTTGAAGA AAACCCCAAA
ACAGCGAAAG CCGTTTGCGA AAAATGTATA GGCGCCGCGG TAGCAAGAGA AGCGGCCAGA
AAAGCGCGTG ATTTAACCAG ACGCAAAAGC GCTCTTGAAG GCGGCGGTTT ACCTGGTAAA
CTTGCCGACT GCCAGGAAAG AGTGGCCGAA AGATGCGAAC TTTTTATCGT GGAAGGTAAC
TCAGCCGGCG GCTCCGCCAA ACAAGGCAGG GACCGTGTTT TCCAGGCTAT ACTTCCTTTA
AGAGGTAAAG TGCTTAACGT TGAAAAAGCA CAGCTTGTTA AAATTTTATC TAACGAGGAA
ATAAGAACCT TGTTTACCGC TTTAGGCACA GGCGTAGGCG AAGGTGAAGG CGGTTTTGAT
ATTTCAAGAT TAAGATATCA TAAAATCGTT CTTATGGCTG ATGCCGATGT TGACGGCCAG
CATATCACCA CGCTTCTTCT TACGTTCTTT TACCGCCAGT TAAGGCCTCT TATTGAGGCG
GGGCACGTTT ATATAGCTCA GCCGCCTTTA TACAAAGTTA AAAAAGGCAA AAACGAGCAG
TATTTACAAA CCGAAGAACA GCTTGTTAAC TGGCTTTCTA AAGAAGGCAT TAACTCAACC
TCGGTAGTAA AAGCGGACAA AACCGCTTTA ACGGCCGTCG AACTTAAGGA TTTACTTAAA
ATCTTAAAAG ACGTTGAAGA TTTGTTAATG AAAATTGAAG TTAAAGGCAT TACTCTTAAT
GAATTTTTGT CTTTTGTTAA CGCCGGACAA ATTCCTTTAT ACCGCATTCC TTTACAAAGC
GGAGGGTTTA GATATTTCTA TACCGAAAAA GAATATGGCG ATTACGCCGC CCAATATATT
TTGGAACGCA AAGAAGTACT TATGGCAGAA GGGGCGGATA TTTCCATGTT AAGTGATGAA
GATCTGGCGC CCGAACACCA AAGTTTGTTT GAATTCGGCA AACTTTTAGC GGCGGATACA
AAGCTCAAGG CTTTCGGTTA TTCCTTGGCT AATTACCAAG ACGCCGTATC CGAAGATGAA
AAGAAAAACC CTCTTTTTAC CGTAAACACA GGCAAATCGG ACGTTTTTGT TTACAGTTTG
CATGAGTTGT TTAAAACGGT AAAAGACGCG GGTTCTTCAG GCTCAACGAT ACAGCGCTAC
AAAGGTTTGG GTGAAATGAA CCCCGAACAA CTTTGGGAAA CCACTATGGA CCCTGCCAAA
CGCAGCCTTA TTAAAGTAGA AATACAAGAC GCTGCCGACG CGGAACAAAT TTTTACCACG
CTTATGGGTG ATAAGGTCGA ACCCAGAAGG GCGTTTATCG AATCACACGC CCTTGAAGTT
AAAAATTTAG ACATTTAA
 
Protein sequence
MTEEVKEKEQ KNYDSSKIQV LEGLEAVRKR PAMYIGSTGL PGLHHLVYEV VDNSVDEILA 
GGATKISVTI KDDMTCSVAD DGRGIPVDPM VNAKDPKLKG KSALEVVMTV LHAGGKFDSG
AYKVSGGLHG VGVSCVNALS EYLEVVVNKD GKQYFQRYHR GKPEEKVKEI GAAKEKGTTV
TFKADTEIFG ELSFSYDTIA NRLRELAFLN AGVKIILTDE RGDEPKTHTF FYEGGISQFV
KYINSNKTTL HAEPIYLTKE INNNYISFAI QYNDSYSENI YSFVNNINTI EGGTHLSGFR
SSLTRVINEY IKDNGLLKNK EVNVTGDDMR EGLTAVLSVK IPHPQFEGQT KTKLGNSEIE
GIVRSMVGDA LTTFFEENPK TAKAVCEKCI GAAVAREAAR KARDLTRRKS ALEGGGLPGK
LADCQERVAE RCELFIVEGN SAGGSAKQGR DRVFQAILPL RGKVLNVEKA QLVKILSNEE
IRTLFTALGT GVGEGEGGFD ISRLRYHKIV LMADADVDGQ HITTLLLTFF YRQLRPLIEA
GHVYIAQPPL YKVKKGKNEQ YLQTEEQLVN WLSKEGINST SVVKADKTAL TAVELKDLLK
ILKDVEDLLM KIEVKGITLN EFLSFVNAGQ IPLYRIPLQS GGFRYFYTEK EYGDYAAQYI
LERKEVLMAE GADISMLSDE DLAPEHQSLF EFGKLLAADT KLKAFGYSLA NYQDAVSEDE
KKNPLFTVNT GKSDVFVYSL HELFKTVKDA GSSGSTIQRY KGLGEMNPEQ LWETTMDPAK
RSLIKVEIQD AADAEQIFTT LMGDKVEPRR AFIESHALEV KNLDI