Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7808 |
Symbol | nifH |
ID | 6249391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010627 |
Strand | + |
Start bp | 582554 |
End bp | 583435 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642599328 |
Product | nitrogenase reductase |
Protein accession | YP_001863734 |
Protein GI | 186474763 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.220892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAC TTCGGCAAAT CGCCTTCTAC GGCAAAGGCG GCATCGGCAA GTCCACCACG TCGCAAAATA CGCTTGCGGC GCTGAGCGAC CTCGGGCAGA AGATCCTCAT CGTAGGGTGT GATCCAAAGG CTGACTCGAC GCGCCTGATA CTGCACGCGA AGGCGCAGGA CACAATTCTC TCGCTTGCGG CGGAAGCGGG TTCAGTCGAG GACCTGGAAC TCGATGACGT GATGAAGATC GGCTACAAGG ACATCCGCTG CGTCGAGTCG GGGGGGCCTG AGCCGGGCGT CGGCTGCGCG GGCCGTGGCG TCATCACGTC GATCAATTTC CTCGAGGAGA ACGGCGCGTA TGACGGCGTG GACTATGTGT CGTACGACGT GCTCGGCGAC GTGGTGTGCG GTGGCTTCGC CATGCCCATT CGCGAGAACA AGGCGCAGGA AATCTACATT GTCATGTCAG GCGAGATGAT GGCGATGTAC GCGGCGAACA ACATCTCGAA GGGCATCCTG AAATACGCGA ACAGTGGCGG CGTGCGCCTG GGCGGGCTCA TCTGCAACGA GCGCAAGACC GACAAGGAAC TGGAGCTTGC CGAATCGCTC GCGACGATGC TTGGCACGAG GCTGATCCAC TTCGTGCCGC GCGACAACAT CGTCCAGCAC GCGGAACTGC GGCGAATGAC CGTGATCGAG TACGCGCCGG ACAGCTCACA GGCGGGCCAG TATCGCGCGC TTGCCGAGAA GATTCATCAC AACGGCGGCA ATGGCGTGGT TCCGACGCCG ATCACGATGG ACCAGCTCGA AGACCTGCTG ATGGAGAAAG GCATCATGGT GCAGGTCGAC GAGTCGCGGG TTGGCAAAAC GGCGGCCGAA CTGACCGCCT GA
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Protein sequence | MSQLRQIAFY GKGGIGKSTT SQNTLAALSD LGQKILIVGC DPKADSTRLI LHAKAQDTIL SLAAEAGSVE DLELDDVMKI GYKDIRCVES GGPEPGVGCA GRGVITSINF LEENGAYDGV DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMAMY AANNISKGIL KYANSGGVRL GGLICNERKT DKELELAESL ATMLGTRLIH FVPRDNIVQH AELRRMTVIE YAPDSSQAGQ YRALAEKIHH NGGNGVVPTP ITMDQLEDLL MEKGIMVQVD ESRVGKTAAE LTA
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