| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7685 |
|---|
| Symbol | |
|---|
| ID | 6249268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010627 |
|---|
| Strand | - |
|---|
| Start bp | 455083 |
|---|
| End bp | 455793 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642599227 |
|---|
| Product | integrase catalytic region |
|---|
| Protein accession | YP_001863633 |
|---|
| Protein GI | 186474662 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3316] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.686467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC TGAAGAGTCC GGAGAAGTTG TTCGGCGGAC GCCATTTTGA TCGGGAGATC
ATCATTCTGT GCGTTCGCTG GTACCTGCGC TACGAGCTCA GCTTTCGCGA TCTGGTCGAG
ATGATGGCCG AACGGGGATT GTCGCTGGCT CACACGACGA TTCTGCGCTG GGTGAGGCGT
TATACACCCG AGTTCATCAA ACGCTGGAAC CGCTTTGCTA CACCTGCGGG TCGCTCGTGG
CGTGTCGATG AGACCTACCT GAAGATTCGC GGCAGGTGGG TCTACCTCTA CCGGGCAGTG
GATCGGGCTG GCCAGACGGT GGACTTCATG CTCAGAGCCC GACGCGACGT GGCTGCGGCC
AAAGCTTTTT TCAGCCAGGC CATCAAGCGT CAGGGCCAGC CGCCGGAGAC CATCACGCTC
GACGGCTATG CCGCCTCGCA CCGCGCAGTG CGCGAAATGA AGACCGATGG TCTGCTGCCT
GAAGACACGA AGGTCCGGTC CTCAAAATAT TTGAACAACG TGATCGAGCA AGACCATCGC
CACATCAAGT CCAGAACGAA CGTGATGCTT GGGTTCAAGC GATTCGGGAG CGCCGCGACC
ACGATATCAG GAATCGTTGA CGCATCGCAT TCGCAAGGGG CAGTTCGATC TCGCGAAGCT
CGGCCTCAAA GAGGCCGCTG GGCCCGCCGT ATGGAATGCG GTCCTGTTTG A
|
|---|
| Protein sequence | MSKLKSPEKL FGGRHFDREI IILCVRWYLR YELSFRDLVE MMAERGLSLA HTTILRWVRR
YTPEFIKRWN RFATPAGRSW RVDETYLKIR GRWVYLYRAV DRAGQTVDFM LRARRDVAAA
KAFFSQAIKR QGQPPETITL DGYAASHRAV REMKTDGLLP EDTKVRSSKY LNNVIEQDHR
HIKSRTNVML GFKRFGSAAT TISGIVDASH SQGAVRSREA RPQRGRWARR MECGPV
|
|---|
| |