| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7648 |
|---|
| Symbol | |
|---|
| ID | 6249231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010627 |
|---|
| Strand | + |
|---|
| Start bp | 423813 |
|---|
| End bp | 424571 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642599206 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001863612 |
|---|
| Protein GI | 186474641 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATA TCGATCACGT ATCAATTCGG TTTCCGACGC GAAATGGCCA CGTCGATGCG
GTTCGTGATG CAAGCATCTC GGTCGGGGAG GGTGAAGTTT TTGGGCTCGT CGGTGAATCG
GGGTCAGGCA AATCGACCCT GCTGCGCGCA TTGACTGGTC TGGTGCCTCT CGCATCCGGC
AATCTGTCAA TCGATGGCAC GAAGATCGGC GGCAAGCTCG ACGGCGAGTT TCGACGCCGG
GTGCAGATGG TGTTCCAGGA CCCTTACGCT TCGCTGCACC CGCGATTCAC GATTGACCAA
GCGCTGCGAG AGCCTCTGAC GATCCACCGG ATCGCTAATG CCGATGCACG CATCGCGCAA
GCACTCACCG AAGTGGGACT CGGACCCACG TTTCGCTTCC GGTATCCGCA TCAGTTGTCC
GGCGGCCAGC GGCAACGCGT CGCGATCGCG AGGGCGCTGA TCGTAGAGCC GCGCGTGCTC
CTGCTCGATG AGCCGACGTC GGCGCTCGAT GTTTCGGTAC AGGCGGAGAT TTTGAATCTG
CTGCGCCGGT TACACCGCGA ACACAAGCTG ACGATGATCC TCGTCAGTCA CAATCTTGCG
GTAGTTGGCT TCCTGTGTGA TCGCGTCGCC GTGATGCAAC ACGGGGAAAT CGTTGAGCAG
CTTACTGTCG ATGATGTGCG CTCGGCGCGC GTCGCCAGCG ACTACACACG TATGTTGCTT
CGAGCGACCG AGGGTTGCCA AGGGCGGCGC GCTGCTTGA
|
|---|
| Protein sequence | MINIDHVSIR FPTRNGHVDA VRDASISVGE GEVFGLVGES GSGKSTLLRA LTGLVPLASG
NLSIDGTKIG GKLDGEFRRR VQMVFQDPYA SLHPRFTIDQ ALREPLTIHR IANADARIAQ
ALTEVGLGPT FRFRYPHQLS GGQRQRVAIA RALIVEPRVL LLDEPTSALD VSVQAEILNL
LRRLHREHKL TMILVSHNLA VVGFLCDRVA VMQHGEIVEQ LTVDDVRSAR VASDYTRMLL
RATEGCQGRR AA
|
|---|
| |