| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7588 |
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| Symbol | |
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| ID | 6249172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010627 |
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| Strand | - |
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| Start bp | 353345 |
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| End bp | 359959 |
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| Gene Length | 6615 bp |
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| Protein Length | 2204 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642599163 |
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| Product | DNA helicase related protein |
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| Protein accession | YP_001863569 |
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| Protein GI | 186474598 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.279157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACTG TAGTAATCGA GCCGGTTGTC GAACCGGAAG CGCCTCGTTG CGTGCTAATC
CATACAACAG TCGCGGGAAG AGTCAATCTC GCAGATTTCC AGAATGCCGT TCCCGTGCTT
CGCGAACTGT CAATCGTGAA CGAGACAGAA AGCGACTTCA CGGAGCTGCG ATTGACGGTG
AATTCGGAGC CACCCTTCCT CAAACCCAAG ACCTGGTATA TCGATCAGCT TGCGGCCGGA
CAAACGGTAC GTCTGACCGA TCTCGACCTG GGTCTTGACG GGCCGTTGCT TGGGCGATTG
ACGGAGTCAG AAAAGTCGGT CGTCTCTTTC AGGCTCGTTT CTTCGAAAGA CGATTCCTCC
GAACTGCAGG CCGTCGATTC CGTCGTTGAT CTTCTTCCGC GCAACCAGTG GGGAGGCCTT
TCATCCCTTC CTGACATGGC GGCGGCATTC GTCCAGCCTA ACGAGCCAGC GATCGAGCGC
GTCCTCAAGC AGGCCGCTGA TATTTTGCGA AAGGCGGGCA AGTCGGGCGC GATCAATGGT
TACCAAGAAG GCGCCCGGCG CGCGTGGGAG CTCGCATCTG CTATCTGGAG CGCCATTGGC
GCGATGGGGC TGGACTACGC TGTGCCGCCC GCCAGTTTCG AGCAACAAGG CCAGAAAGTC
CGTGGCCCCG GCCAGATTGC TGAATCGGGT TTGGGCACCT GTCTCGATCT CGCCCTTTTC
GCGTGTGCGG CGATCGAGCA GGCTGGGCTG AATGCTGTAC TCGTGTTTCA GAAGGGGCAT
GCATTCCTAG GTGTCTGGCT GAAGCCCGAA GAATTCTCGA CGACCGTCGT CGACGACATC
ACTGCTCTTC GCAAGCGCGT AAAGCTGAAG GAGATGGTTC TTTTCGAGTC GACATTGCTC
ACACAACGTC CGTTGCCAGC GTTCAGTTTT AGCATCGCGA AAGGCGAAGA GCACATTTCC
GAAGAGGAAG AGGCAAAATT CGAACTGGCC ATTGACATCC GGCGCGCACG CCTGCAACGC
ATCAAGCCTC TCGCCAGCGA GCAAGCTGTT GTGCGCAGCA CGGGCGGCAC GAATGCCGTT
GATGAACTGG AGCCAACCTG GGAAGACGCA CCGGATTTTC CTGAAGAGTT CGACGACACA
AAAGCTGACG ACCCTTTTGA GCGCCCAGAG GACCGCCTGA CCCGCTGGCA GCGCAAACTT
CTCGATCTCT CGCTGCGGAA CAATCTGCTG AGCTTCAAGG CCGGCAAAAA ATCAGTGAAG
CTCGATGCGC CCGAGCCGGG ACTACTTGAA GACGTACTGG CTGAAGGCCA TGCATTGAAG
CTTCTCACCC GCCCTGACCT GATGGACGGT TCGGACCCGC GTAGCCAGGC GATTCACGAA
GCCCGCGAAC GGGAACATAT CCGGCGTCAG CACGCCCTGG ATGCGCTAAA ACGCAAAGAA
GTCTTCGTCG GACTGACGCA AGACGAGATG GACACACGCC TGCTCGAGCT CTTCCGAAGC
TCGCGGACAA CGCTTCAGGA GGGCGGCTCC AATACGCTGT ACCTTGCATT GGGCTTCCTG
TCATGGACCC GAGATGACAA GGATGACAAA AAGTATCGTG CGCCACTCAT CCTGGTCCCT
GTCTCTCTTG AACGCCGCAG CGCCCGCTCC GGTTTCAGTC TGAAGCTGCA TGACGACGAA
GCCAGATTCA ACCCGACACT CATCGAGATG CTGCGTCAGG ATTTCGAGCT TGAACTCGGC
GTGCGAGACA CAGAGCTTCC GAAGGATGAC TCCGGCCTCG ACGTCGCAGG TATCTGGAAA
ACGGTCTCCA ATTCCATCAA GGACATCAAG GCGTGGGAAG TCGTCGAGGA TGTCGTCCTC
GCATCGTTTT CGTTCGCCAA GTATTTGATG TGGCGTGACC TGACCGAACG TACCCAGCAG
CTCAAACAGA ATCCCGTCGT CCGGCACCTC ATCGACACGC CGCGCGATTC GTATCAGAAC
ACAGTGGAGT TCCCCGACGT AAGGCGTCTC GACGCCGAAC TCCCGGCGAA GGAGACGTTT
TGCCCACTTC CGGCCGACTC CTCACAGCTG TCTGCCGTTG TCGCGGGCAG CAAGGCCAAG
GATTTCGTCC TTATTGGCCC GCCGGGCACC GGCAAGAGCC AGACGATTGC CAATCTGATC
GCGCAGTTCC TAGCTGAAAA GAAGCGCATT CTGTTCGTAT CCGAGAAGAT GGCAGCGCTG
GACGTCGTCT ACCGGCGCCT TGCAGACGTT GGCCTTGGCA ACTTCTGTCT CGAGCTTCAC
TCGAGCAAAG CCCGCAAGAC TGAGATTCTA GAGCAGCTAC GCACATCATG GGACGCATCG
GCTGCGTTCG CGCCAGAGGA GTGGCATGCC GAAGCAGCCC GTCTCGAAGG GCTTCGATCG
CAGCTCAACG GCTACGTTGA ACGCCTGCAT CATCGCCACC CGAATGGCTT GAGCGTGTAC
GAAGCCATTG GCCGGGTCGT CGGAGGCCGT GACCTGCCGG TGCTGCGGAT GTCGTGGCCG
TCAGCTCAAA CTCACGATTT GGAAGCAATG CGCGGGTTAC GTGAAACGGC TGAACTACTC
GATGTCAACG CAAAAGCTTT CGGTGAAGAG CATCTCAAGG AAACTCCGCT CGCACATGTG
GTCCAGACCG AATGGTCGCC ATTGTGGCAG GCGGGCCTTG AGGACGCAGC CAGAGGCGTA
CCCGATGCGG CCGCCCGCTT CGAGAAGGCG GCGTCCGAAC TGGGTAACGC AATCGGACTG
CCCTCGCTGA CGCTGGACGC ACGCGTGCGG GCAGGTCTGC GCCTGCTAGC AGCCACGCTG
CCAGCTGCTG CAGGGTACGA CTGGCAGTTC GTCCTTCGCC CTGACGCAAA ATCTGTCGCC
GATGGGTTGC GTCAGGCAAC TCCGCTGCTT GAGCGTTATC GCGAACTGCT CAGTGATCTG
TCTACGCCAC GCTCAAACCA GACGCTCGAC GATCTGCGTT TGGGTATCAG CCAGCTCCAG
CGTGAGGCCG AATTGCACGC GCAGTTATCC CGGCCGTGGA ATGAAGCCTT GCAATCGCGA
CTGGCATCGG GCATCGAGCT TTTGCGGAAC CGCCAGGACG TCGTCGGCCA ACTTTCTCTC
TCATATAAGG AGGGAATTTC GACGAAGACA GTCGCTGAGC TTCAGTCAGA CCTCCGCGAG
CTCAAGGCAT CGGGTTGGCC GATGAGCATG ATGCGCAAAC GGGCTCTTAC CAGGAAGCTG
AAGGAACTTG CCACGGCAGA TGGGGAGCCA GATATTGATG GCGATATCGA ACGGCTTGCA
AAGATCGATA GCCTGACCAT CGAACTGAAG GCGTTCGATG ATCTGTCGTT CCCAACATCG
AATGCATGGG CCGGCCTTAA GACCGAACTC GATGTGGTCC GCGCGCTGCT TTCATTCCAG
ACGGCGCTGG AAAAGGCTCG CGAACGCTCA GCATGGGAGG ACGTTGGACT CGATCCTGTC
GGTCGCGGGC AATGTGGCGA TGTGGCACGC GAAGACCTGC AGCGTTTGCG CGAATTGCGG
CAAATCGCAC AGATTGTCAA TCGCCTCGCC ACTCTCGAAT CTGACACCGA CGCCGTGTGG
TCCGGATATA GCACAGATGT CTCCATCGCG AAGGCCTATT TGTCGTTCCA TGGCGCCCTC
ACGGCAGCTC GTGCCGAAGG TCATTGGGTC GATGATGGGT TTTCGGCTGT AGAGTCCGGC
CGTGCTGGCG CATCCGCCGC TGCCGACCTG AAACGCATGC GTGAACTCGT CTCACTGCGG
GCACGTCTTC AGGAATTTTC AGACCTGTCC ACGAGAAGCT CCGGTCTCTG GAACGGCCTG
CAAACCAAGA CGGAAGGAAT TCAGCCGGCG CTCGATTTTT TTGAGGCATT GAGCAGTGCC
TTGGCAAGCC TGGCCAGCAC GCCCGAGCTA CTTGCTGCAG TTAAAGCTCA GATATCGCTC
CTGCTTGGCG ACAGCAACGC CCTCCTCGCA CCATCTGGAA TCGTTGCGGG CTCCGGGCGC
ATGTATGCTG ACGCTCTGAG CGCATTCGAT CATGCCGTGT CCCAATTTGC CACGGCAAGC
GGACTGGCGT CCGCCGAGCA TTCAGTTCTG TCGGAATTGC CATCGGGACA AATTGCCGGA
CGCGCCCGGG AAGTGGTCCA GGGCGCAAAC CGCCTGCGGG TATGGTGTGC ATGGCGGAAG
GTTCGCCAAC ATGCGCTCGC ACTCGGTCTT GCGCCGCTCG TTGACGGGAT CGAACAAGGT
GCTATTCCGC GTGGGTGGGT GAAGGAAGTA TTTGAAACCG ACTATTGCCG CTGGTGGCTG
AATGCTGTCG TGGACGCCGA CGAAGTGCTG CGCACGTTTG TCTCGGCAGA ACACGAGAAG
CGCATCCACG ACTTCCGTGA ACTCGATGAA CGGTTCATCT CGTTGACGCA GGACTGGGTC
CGCGCGCAAC TGTCAGCGGG CCTTCCCTCG CCGGCCAAGG TAGCGCACGG TTCGGAATGG
GGTCTTCTGC GCTATGAGAC GCAGAAGAAG ACTCGACATC TGCCGCTGCG CGAACTGATG
TCTAAGGCAT CTGGCGCAAT CTCACGACTT ACGCCGTGCC TGTTGATGAG TCCGCTTTCG
ATCGCACAGT ACCTGCCCGC CGAGACAGCG GACTTTGACG TGGTCGTCTT CGACGAGGCC
TCGCAGATTC CGGTATGGGA CGCGATTGGT GCGATGGCTC GCGCGCGTCA GGTCATCATG
GTCGGAGACC CCAAGCAGTT GCCGCCTACC AGCTTCTTTG ACCGCGCGGA ATCCGATGTT
GACGACACCG ACGTCGAGAC TGAGCTCGAA AGCATCCTGG AGGAATGTAT CGGTGCCAAC
CTGCCGACGA TGAAATTGTC GTGGCACTAT CGTAGCCGTC ACGAAAGTCT TATCGCATTC
TCGAATTACC GCTATTACGG CGGTGATCTC GTGACCTTCC CGAGCCCTGT CACGAACGAC
CGCGCGGTCA GCTTCAACCT CGTTCCACAA GGGCAGTACG AGCGCGGTGG CGCTCGTACC
AACAAGCCCG AAGCGAAGGC GCTGGTTGCA GACCTGATCG ATCGTCTCAG ATCTCCGGGC
TTTCGCGACA GTGGACTGAC AGTCGGTGTC GTAACCTTCA ACGCGGAACA GCAGCGGCTC
ATCGAAGACC TGCTTGATGA AGCGCGTCGC AAAGATCCTT CAATCGAGTG TCATTTCGCG
GAAACTGCAC CTGAGCCAGT GTTCGTAAAG AATCTGGAAA GCGTCCAGGG TGACGAACGG
GACATCATGT ACTTCTCGAT CACCTATGGC CCGGGTATTG ACGGGACGAT GCCAATGAAC
TTCGGCCCGA TGAATCAGCA AGGCGGCGAA CGGCGTCTGA ATGTTGCGAT TACGCGAGCA
CGGCAGGAGT TGCGCGTATT CGGCAGCTTC AAACCGGAAA GGATGGACCT CTCGCGGACG
CAGGCACTGG GCGTCAGAGA CCTGAAGCAC TTCCTCGAAT TCGCTGAGCG CGGCGCCCGA
GGGCTGGGCA AGGCGGTCGC TGGCAGCATC GGAGACTTTG ATAGCCCGTT TGAGAAAGCC
GTATGCGCCG CGCTTACTGA GCGAGGCTGG ACGGTTCATC CGCAGGTGGG CGTATCCGCG
TTCCGCATTG ACCTTGGTGT CGTCGACCCG GACGCTCCGG GACGGTATCT GGCTGGCGTC
GAGTGCGACG GCGCCACCTA TCACCGCTCT GCGACAGCGC GCGATCGCGA CAAGCTTCGG
GAACAGGTGC TGCGTGGGCT GGGCTGGGAG ATCGTTCGCA TCTGGTCAAC GGACTGGTGG
GTCGACGCGC CCGGTACACT GGAAAAGGTT CACGCGCAGC TCGAAGCCCT CATCGCCGGC
CGGCGTGCCG AAGCCGCTGC AGAAGAAGAC CGCGCCGCAG AGCCGGCGCA ACGGGCTATT
GCGGCGGCAA AGGCGGACAG TAGCGATGCT GAAACGACGA CGCACCGCAC AGAATTGGAT
GCAGCTAACC CGGTGCAGCA GACCAACATC GCAGCGACCG ACATTTCGGT CGGTAGTCCG
GCGACGTATG CACGCAATGG CTCGATTCCA ACTGTCGAAG TTTCCCCCGG CGCCACATTC
ATCGAGGTTG ATCTGGCGAT GACAGACCAT GTAGCCGATG CTGAGCAATT CTTCGAACGG
GGCTACGACT CACGGCTGCT AGCAATGGTT GAACACATTG TCAAGGCTGA GGGACCTATC
CGTGATGAAG TACTTGCTCG TCGAATTGCC CGGGCTCACG GCTGGTCCCG TACCGGGGCT
CGCATCCTGG AGCGCGTGGT CGATCTGACG AAGCGATACT TTCATGGCGA ACCGGAAGAC
ATTGGCGTGT TCTTCTGGCC AACGCGCGAC ACAGCAGAAC ACACGGTCGT ATTCCGACGA
CCCTCTGAGG GCTCGACGCG TGCAGTCGAC GAAATCGCGC TCGCTGAACT GGCCGCGCTC
GCCACCGAGT TAAAGGGGCG AGGCTATGAC CGCGAAAACG GCTTGACGGC CATGGCGAAG
GAAATTGGTC TTCTCAAACT GCGTACCGCC AGCAGGGAGC GCCTCGAGCG AGCGTGGGAA
ACCGCACGCG AGTAG
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| Protein sequence | MDTVVIEPVV EPEAPRCVLI HTTVAGRVNL ADFQNAVPVL RELSIVNETE SDFTELRLTV
NSEPPFLKPK TWYIDQLAAG QTVRLTDLDL GLDGPLLGRL TESEKSVVSF RLVSSKDDSS
ELQAVDSVVD LLPRNQWGGL SSLPDMAAAF VQPNEPAIER VLKQAADILR KAGKSGAING
YQEGARRAWE LASAIWSAIG AMGLDYAVPP ASFEQQGQKV RGPGQIAESG LGTCLDLALF
ACAAIEQAGL NAVLVFQKGH AFLGVWLKPE EFSTTVVDDI TALRKRVKLK EMVLFESTLL
TQRPLPAFSF SIAKGEEHIS EEEEAKFELA IDIRRARLQR IKPLASEQAV VRSTGGTNAV
DELEPTWEDA PDFPEEFDDT KADDPFERPE DRLTRWQRKL LDLSLRNNLL SFKAGKKSVK
LDAPEPGLLE DVLAEGHALK LLTRPDLMDG SDPRSQAIHE AREREHIRRQ HALDALKRKE
VFVGLTQDEM DTRLLELFRS SRTTLQEGGS NTLYLALGFL SWTRDDKDDK KYRAPLILVP
VSLERRSARS GFSLKLHDDE ARFNPTLIEM LRQDFELELG VRDTELPKDD SGLDVAGIWK
TVSNSIKDIK AWEVVEDVVL ASFSFAKYLM WRDLTERTQQ LKQNPVVRHL IDTPRDSYQN
TVEFPDVRRL DAELPAKETF CPLPADSSQL SAVVAGSKAK DFVLIGPPGT GKSQTIANLI
AQFLAEKKRI LFVSEKMAAL DVVYRRLADV GLGNFCLELH SSKARKTEIL EQLRTSWDAS
AAFAPEEWHA EAARLEGLRS QLNGYVERLH HRHPNGLSVY EAIGRVVGGR DLPVLRMSWP
SAQTHDLEAM RGLRETAELL DVNAKAFGEE HLKETPLAHV VQTEWSPLWQ AGLEDAARGV
PDAAARFEKA ASELGNAIGL PSLTLDARVR AGLRLLAATL PAAAGYDWQF VLRPDAKSVA
DGLRQATPLL ERYRELLSDL STPRSNQTLD DLRLGISQLQ REAELHAQLS RPWNEALQSR
LASGIELLRN RQDVVGQLSL SYKEGISTKT VAELQSDLRE LKASGWPMSM MRKRALTRKL
KELATADGEP DIDGDIERLA KIDSLTIELK AFDDLSFPTS NAWAGLKTEL DVVRALLSFQ
TALEKARERS AWEDVGLDPV GRGQCGDVAR EDLQRLRELR QIAQIVNRLA TLESDTDAVW
SGYSTDVSIA KAYLSFHGAL TAARAEGHWV DDGFSAVESG RAGASAAADL KRMRELVSLR
ARLQEFSDLS TRSSGLWNGL QTKTEGIQPA LDFFEALSSA LASLASTPEL LAAVKAQISL
LLGDSNALLA PSGIVAGSGR MYADALSAFD HAVSQFATAS GLASAEHSVL SELPSGQIAG
RAREVVQGAN RLRVWCAWRK VRQHALALGL APLVDGIEQG AIPRGWVKEV FETDYCRWWL
NAVVDADEVL RTFVSAEHEK RIHDFRELDE RFISLTQDWV RAQLSAGLPS PAKVAHGSEW
GLLRYETQKK TRHLPLRELM SKASGAISRL TPCLLMSPLS IAQYLPAETA DFDVVVFDEA
SQIPVWDAIG AMARARQVIM VGDPKQLPPT SFFDRAESDV DDTDVETELE SILEECIGAN
LPTMKLSWHY RSRHESLIAF SNYRYYGGDL VTFPSPVTND RAVSFNLVPQ GQYERGGART
NKPEAKALVA DLIDRLRSPG FRDSGLTVGV VTFNAEQQRL IEDLLDEARR KDPSIECHFA
ETAPEPVFVK NLESVQGDER DIMYFSITYG PGIDGTMPMN FGPMNQQGGE RRLNVAITRA
RQELRVFGSF KPERMDLSRT QALGVRDLKH FLEFAERGAR GLGKAVAGSI GDFDSPFEKA
VCAALTERGW TVHPQVGVSA FRIDLGVVDP DAPGRYLAGV ECDGATYHRS ATARDRDKLR
EQVLRGLGWE IVRIWSTDWW VDAPGTLEKV HAQLEALIAG RRAEAAAEED RAAEPAQRAI
AAAKADSSDA ETTTHRTELD AANPVQQTNI AATDISVGSP ATYARNGSIP TVEVSPGATF
IEVDLAMTDH VADAEQFFER GYDSRLLAMV EHIVKAEGPI RDEVLARRIA RAHGWSRTGA
RILERVVDLT KRYFHGEPED IGVFFWPTRD TAEHTVVFRR PSEGSTRAVD EIALAELAAL
ATELKGRGYD RENGLTAMAK EIGLLKLRTA SRERLERAWE TARE
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