| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7585 |
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| Symbol | |
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| ID | 6249169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010627 |
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| Strand | - |
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| Start bp | 348410 |
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| End bp | 350005 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642599161 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001863567 |
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| Protein GI | 186474596 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.145494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACA GAAGACCCCT CCTCTTCCTC GAACCGATTC TCGCGACGCC CGCGATTGAG
AAAAACGGGG TCACGGTCGC GATCCGTTCC TCACTGCTGT CGTCGTTGTT CAGCGACCAG
CGCTCGTTGT TCCTGTCCAG TGTCGCCAGC GGGTTTGTCG CTCTGGTGGC GCTCGTGAGC
CTGCGTCAGC TGTGGCCGGC CCTCTGGTTG TTGACAGGCA TGAGTGTCGT TTCCGCACGC
CTCTTCATTG CGCATTCGTA CATTGCCGCC AGCCGTTCCA GCGCGATTCA TCCGCTTCGC
CCAGCCCGGC GGTACGCACT GCTGGCGCTG GCATCTTCTA CCGTGCTGGG GACCGGCTCG
ATGGCCTGTA TGATGTCCGG CGATGCTGCG CTGAGCGCGC TTGCCATCAT GGTGACGGCG
GGCACACTTG GCGGAGTTGC GTCGAGAAAT GCGGGGGTGC CCCGTCTGGC AATCGCACAG
GTTGGGCTGG GTGCAGCGCC GATCGGGCTG GGCGCCCTGC TTGCACCCAT CCACGCATAC
TGGGTGCTCG TACCGCCGCT TTTTGCGTAC GTCGTTGCAA TGGCGTCGAT TGTCCGACGC
CATTATTCGG GACTCGTCGC GCTGATGACG GCCGAACAAA CGAACGCGGA GCTGGCGGCC
CGGTTCGATG CGGCCCTTAC CCATATGCCT CACGGCTTGT GCACGGTAGA CGAATCCGGG
AAAGTGGTCA TCGCGAACCG GCGCACCGCG GAACTGTTCG GTGCCACCGT TGAAATGCTG
AGGCTCAACG TTCCGTTGCC CGAGTTTATT GGCCATGTAA GCCTGGAGAA GTTTGGCGAA
ACGCTCAGGA AACAGCTTGT CGAGCGATGT ACCACATGGC TGTCAGCTGG ACGCGGTCCT
CTCGAGCTGG AACTCAATGA TGGCCGCCAG CTCGAGATGA CGCAAAATCC GGTGCCTGAC
GGAAGCGCGG TGATCATCAT CGAGGATGTG ACCGAGCGCC GGGAAGCCGA AGCGCAGATG
CGCCACTGGG CGCGACATGA CCCGCTTACC GGCCTGCCGA ACCGCCGGCA CCTGGGCGAG
CATCTCGAGA GCAGACTCGT CGGCGCCGAG TCCGAGACCA ACCATGAGCC GGTGCTTGCC
CTGATGTTTC TGGATCTGGA CGACTTCAAG AAGGTCAACG ATGGTCTTGG TCACCACGCT
GGGGACCTGG TATTGAAAAC GGTTGCGGAC CGTCTTGGAA AAACACTGCG ACAGGGCGAA
CTGGTGGCAC GCGTAGGCGG CGACGAACTG GCCATTGTCG TTGAGCGTGC AACTTCAGCC
GCTTGCGCCG CACTCGCGCA GCGCATTATC GAACGGCTCT CGGAACCGTA TCGGCTACCA
GCCGGCACCA CGGCCACGAT TGGTGCGAGC ATCGGTATTG CGTTCTCCAT CAATGGGGAA
TCCATCGATC TTCTGACGGA GCGCGCTGAC GCAGCCCTGT ACGAGGCAAA GAAAGTGGGC
AAAGGAACAT TTCGTTTCGC CGCGACGGAG GCGGCAGAGG TCGACACCGC CATTACCAGG
GACGACGACA CAAACGCCAA CTGCTGCTCG AGCTAG
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| Protein sequence | MPDRRPLLFL EPILATPAIE KNGVTVAIRS SLLSSLFSDQ RSLFLSSVAS GFVALVALVS
LRQLWPALWL LTGMSVVSAR LFIAHSYIAA SRSSAIHPLR PARRYALLAL ASSTVLGTGS
MACMMSGDAA LSALAIMVTA GTLGGVASRN AGVPRLAIAQ VGLGAAPIGL GALLAPIHAY
WVLVPPLFAY VVAMASIVRR HYSGLVALMT AEQTNAELAA RFDAALTHMP HGLCTVDESG
KVVIANRRTA ELFGATVEML RLNVPLPEFI GHVSLEKFGE TLRKQLVERC TTWLSAGRGP
LELELNDGRQ LEMTQNPVPD GSAVIIIEDV TERREAEAQM RHWARHDPLT GLPNRRHLGE
HLESRLVGAE SETNHEPVLA LMFLDLDDFK KVNDGLGHHA GDLVLKTVAD RLGKTLRQGE
LVARVGGDEL AIVVERATSA ACAALAQRII ERLSEPYRLP AGTTATIGAS IGIAFSINGE
SIDLLTERAD AALYEAKKVG KGTFRFAATE AAEVDTAITR DDDTNANCCS S
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