| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7533 |
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| Symbol | |
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| ID | 6249117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010627 |
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| Strand | - |
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| Start bp | 305400 |
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| End bp | 306077 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642599113 |
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| Product | type IV secretion system family protein |
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| Protein accession | YP_001863519 |
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| Protein GI | 186474548 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0210387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0576761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGTCA ACGATGTCGA ACGCCCGGCG CGCCTGCTGC GGGTGGGTCG TGTGGCCGTC
ACCGCGCTCT GCCTGTATGC AGCGATCATC GCACACGCCC AAGGTGTGCC AACCATCTCG
CCCGCCGAGC TTGCCCAGCA GATGATGCAG GTTCAGCAGC TGATGCAGCA GATCGAGAAC
CAGGAGGCAC AGTACCGCGC ACTCACCGGT AACAGCAGCC TGGGCACGAT CATGAACGAC
GCGTCGCTGC GCCACTACCT GCCGGAACAG TGGCAAGACA TCTATGACCA GGCGAGGAGC
GGCAGCCTGA CCGGCATCAG CTCGTCGATG CGCTCGATCA AGCAGCAGGA AGGCATGACC
GACGCCTCGA CGCCGGGGCA ACAACGCTAC TACGACGTGC TCGCGGCCAA CAAGGCGATG
AACGAGCAGT CGTACAGCGC GACGATGGCG AGGCTCAATA ACATCCAGTC GTTGATGCAG
CAGTCGAACC TCACGCAGGA TCCGGCCGAA AAGGCGGACC TGCAAAACCG GATGGCTGCC
GAAGAAGCGA TGGTTACCAA TGAGCAGACG CGCCTGCAGC TCACCGCACA GTTGCAGCAG
GCCGAACTCA AGCTCGCGGC GGAACAGCGC GACCGCGAAT TCAAAAACCA GTTCCTCGGA
GGTTCAAGTG GCGAATAA
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| Protein sequence | MNVNDVERPA RLLRVGRVAV TALCLYAAII AHAQGVPTIS PAELAQQMMQ VQQLMQQIEN
QEAQYRALTG NSSLGTIMND ASLRHYLPEQ WQDIYDQARS GSLTGISSSM RSIKQQEGMT
DASTPGQQRY YDVLAANKAM NEQSYSATMA RLNNIQSLMQ QSNLTQDPAE KADLQNRMAA
EEAMVTNEQT RLQLTAQLQQ AELKLAAEQR DREFKNQFLG GSSGE
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