| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7522 |
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| Symbol | |
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| ID | 6249106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010627 |
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| Strand | - |
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| Start bp | 295438 |
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| End bp | 297243 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642599102 |
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| Product | TRAG family protein |
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| Protein accession | YP_001863508 |
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| Protein GI | 186474537 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.445518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.175078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCACA CGTATCCACC ATTCATCGTC GGCAAATTCA AGGGCGAGTA TCTGAAGTAT
CGCGGCCAGG ACTTCCTCAT GCTTGCCGCC GGCACGCGCT CGGGCAAAGG CGTCTCGATG
GTGATCCCGA ATCTTCTCAC CTATCCCGAT TCGGTCGTCG TCGAGGACAT CAAGGAAGAG
AACTTCATGT ACACGTCCGG CTACCGCAGG AAGTGCGGTC ACGAGGTCTA CCTGTGGTCA
CCGTTTTCCG AAAATGGCCG CTCGCACGCA TACAACCCGC TCGAGTACAT CGCTGGCCGA
CCGGCCTATA CGCGCGTGGG TGACGTGATG ACGATCGGCG AGCATCTGTA TCCGTCGAAT
GTCGACGCGC GCCTGAGGTA CTGGAATGAC AACGCCCGCA ACCTGTTCAT TGGGATCGTG
CTGTACCTCC TTGAAACGCC GTCGCTGCCG TGCACGTTCG GCGAAGTGTT GCGGCAGGCC
TCCGGCAAGG GCCGCGCGAT TCGCGAGCAT GTCTCGTCGA TCGTCAGTAC GCGCGCGAAT
GCCACCGACA CGCTGCCTGC CCTGAGCTTC GAGTGTCTGG ACGCGCTCAA CCGCTTTCTG
TCGCAGTCGA GGGAAGCGTT TGCCAATATT GTGTCGACGA TGACGGCGCC GCTAAACGTG
TTCAGCAATC CCGTCGTCGA TGCGGCGACG AGCCGTTCTG ATTTTCATCT GGGCGAGGTA
CGAAAGAAGC GCATATCCAT CTATGTTGGT ATCAAGCCGG GAGACCTGAA GGCGGGCGCG
CTGCTCGTCA ATCTCTTCTT CTCACAGCTG ATCGACCTGA ACACGCGTGA GCAGCCTGCC
GAGAATCCGG AGCTCAAGTA CCAGTGCGCG CTGATGATGG ATGAGTTTGC GGCACCGGGA
AAGATCGACA TCATCGATAC GGCCAACGCG TTCATCGCCG GCTTCAACCT GCGGCTCATG
CTGATTTTCC ACGGCATGTC GCAGCTCGAG GATCCGAAGC TGTACGGCAG GCACGGTGCG
GAAACACTGG CGATCAACTG CAAGATGCGT AGCCTCTTCG CGCCGCGCAC GCTGAAGGAC
TCGGAAGAGT ATTCGAAGAT GCTGGGCACG TTCACGCATC TGTCGCGCTC TCGCAGCCGC
AGCCGCGGCC GCAGCGCGTC CACGAGTACG AACGAGACCG AGCACGGCCG GCCGCTGATG
CTGCCGCAGG AACTGCGAGC CCTGTCCAGC CGCAAGCAGA TCATCACGAT CGACGGTTGC
GAACCGATCC TGTGCGACAA GGCGTACTTC TACGAGGATG CCGAGCTCGT CGACCGCCTG
GTCCAGCAGA GTCCCTACCT GCTGGGGGTG ATGGCCAGTC TCGAAAAGAC GAACCGTCGC
CGTGCATGGT TCGGGTTCGG ACCGAAGTTC CCGAACGAGG AGCAGATGAA GCACGCCGCG
TTTGTTGCGC GCGAACTCAG TGCGCCCGTG CCGCAGATTG ATGTCGAGCA GTGGTGGCAC
TCGCAGAATG CCGCGCGTCG CGCCCAGGTT GAGCCTGCAG CGGGCGCGGC AGAGACAGCC
GGGGTGCGCG ATGTCCGCGA ACATGAAATT GGCGTGCTCT GCGCCGGGCA CTTCACCAAC
CGCGGCAGTA TCCGCGCCGC GCTGTTCCGG CTCATGCCGT ACCTGAGCGA GGTGCTGCCC
GATGGGGCCG CTTCGGCACG GGCGGACACA GCCAGTTCAC AAGCCGCGTT GCAGACCGGT
TCGCACTCCG ATTCGCCAGC CGCCCCGCAA CCTGATCAGC AGCCTGAACA AGGAGTTGTC
GCATGA
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| Protein sequence | MSHTYPPFIV GKFKGEYLKY RGQDFLMLAA GTRSGKGVSM VIPNLLTYPD SVVVEDIKEE
NFMYTSGYRR KCGHEVYLWS PFSENGRSHA YNPLEYIAGR PAYTRVGDVM TIGEHLYPSN
VDARLRYWND NARNLFIGIV LYLLETPSLP CTFGEVLRQA SGKGRAIREH VSSIVSTRAN
ATDTLPALSF ECLDALNRFL SQSREAFANI VSTMTAPLNV FSNPVVDAAT SRSDFHLGEV
RKKRISIYVG IKPGDLKAGA LLVNLFFSQL IDLNTREQPA ENPELKYQCA LMMDEFAAPG
KIDIIDTANA FIAGFNLRLM LIFHGMSQLE DPKLYGRHGA ETLAINCKMR SLFAPRTLKD
SEEYSKMLGT FTHLSRSRSR SRGRSASTST NETEHGRPLM LPQELRALSS RKQIITIDGC
EPILCDKAYF YEDAELVDRL VQQSPYLLGV MASLEKTNRR RAWFGFGPKF PNEEQMKHAA
FVARELSAPV PQIDVEQWWH SQNAARRAQV EPAAGAAETA GVRDVREHEI GVLCAGHFTN
RGSIRAALFR LMPYLSEVLP DGAASARADT ASSQAALQTG SHSDSPAAPQ PDQQPEQGVV
A
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