| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7494 |
|---|
| Symbol | |
|---|
| ID | 6249078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010627 |
|---|
| Strand | - |
|---|
| Start bp | 267740 |
|---|
| End bp | 268507 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642599080 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001863486 |
|---|
| Protein GI | 186474515 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0124491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGC TTATGACCGC CGCTGCGTTT TGCGTGATGG CGTCTTCTGC GTTTGCCACC
GATACCCTGC GCTTCGGCAT CGAGGCAGAC TATCCACCGT TTGAATACAA GTTACCAAGC
GGAGAATTGA CGGGCTTCGA TATCGATATC GGCAATGCCG TGTGCGCGCG AATGCAGGTC
AAATGCAAGT GGGTTGAAAA TTCGTTCGAT GGCCTCATTC CGGCCTTGAT GGCGAAGAAG
TTCGACGCTA TTAATTCGGG CATGTGGGAT ACCCCGCAGC GCGAGCAAGT AATTGATTTT
ACATCCGTCA TTTATGCGAC CCCGATGCGT TTGGTCGCGC GCACGGACAG TCATATTTTA
CCGAACGCAG AATCGCTCAA AGGCAAGCGC GTCGGTGTTC AGCAAGGCGG AGCCCAGCAA
ATCTATGCAG AACAGAAGTG GGCACCAGCT GGTGCTGTCA TCATCACATA TCCAAGTCAA
AGCGCGTTAT TTTCGGACTT GGCAGGTGGC CGGATTGATG CTGCTTTGGG AGCACAGCAA
AACGCGGAGG ATGGTTTCCT GAAAACGCCA GAAGGCAAGG GGTTTGCTTT TGTTGGACCA
GGTCTGCTCG ACGAGAAGAT AAGTGGCCGT GGCGTGGCCT TCGGCGTCCG CAAGCAGGAT
AAGGAACTGA GAACCCGCCT GAACGAGGCA ATTGCCTCCC TAAAACAGGA TGGCACGCTC
AACAAGATTG CTAAAAAGTA TTTTAAATTT GAGGTTATCA CACCGTGA
|
|---|
| Protein sequence | MRQLMTAAAF CVMASSAFAT DTLRFGIEAD YPPFEYKLPS GELTGFDIDI GNAVCARMQV
KCKWVENSFD GLIPALMAKK FDAINSGMWD TPQREQVIDF TSVIYATPMR LVARTDSHIL
PNAESLKGKR VGVQQGGAQQ IYAEQKWAPA GAVIITYPSQ SALFSDLAGG RIDAALGAQQ
NAEDGFLKTP EGKGFAFVGP GLLDEKISGR GVAFGVRKQD KELRTRLNEA IASLKQDGTL
NKIAKKYFKF EVITP
|
|---|
| |