| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7454 |
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| Symbol | |
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| ID | 6249038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010627 |
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| Strand | + |
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| Start bp | 224622 |
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| End bp | 226121 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642599058 |
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| Product | glycolate oxidase subunit GlcD |
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| Protein accession | YP_001863464 |
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| Protein GI | 186474493 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.108738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACG CCTACGACGA ACGGATCGAC GGCCCCCTTC CCTCGCACGA TAAAGCCGCG
CTGGTTGCCG AGTTGCAGCG CGTCATGCCC GGCATGCAAC TGCTGCACGA CCGGGAGGAT
CTGCGTCCGT TCGAATGCGA CGGACTTTCC GCCTATCGCA CGACACCGAT GATGGTCGCG
CTGCCCGACT CGATCGAGCA AGTGCAGGCG CTGCTGAAAT TCGCCGCGGC GCGCAAAGTG
CCCGTCGTCG CGCGCGGCGC GGGCACGGGG CTGTCGGGCG GCGCGCTGCC GCTCGAACAG
GGCATCCTGC TCGTGATGGC GCGCTTCAAC CGCATTCTGC ACATCGACCC CGAAGCGTCG
ATCGCGCGCG TGCAGCCCGG CGTGCGCAAT CTCTCGATCT CGCAGGCAGC CGCGATTCAC
GGCCTCTACT ACGCGCCCGA TCCGTCCTCG CAGATTGCAT GCTCGATCGG CGGCAATGTC
GCCGAGAACG CGGGCGGCGT GCACTGCCTG AAATACGGCT TGACGGTGCA CAACATCCTG
AAGCTCGAAG TGATGACCAT CGACGGCGAG CGCCTGACGA TCGGCTCCGA AGCGCTCGAC
TCGCCCGGCT TCGACCTGCT CGCGCTGTTG GCGGGATCCG AAGGCATGCT CGGCATCGTC
ACGGAAGTCA CCGTGAAGCT GTTGACGAAG CCGCAAAGCG CGAAGGTGCT GCTCGCGAGT
TTCGACGACG TAGAAAAAGC GGGCGCGGCC GTCGCGCGGA TCATTGGCGC GGGCGTGATT
CCAGGCGGCC TCGAAATGAT GGACAATCTC GCGATCCGCG CCGCCGAGGA CTTCATCCAC
GCGGGCTATC CCGTCGATGC CGAAGCAATC CTGCTGTGCG AACTCGACGG CGCGGAATCC
GACGTGCAGG AAGATTGCGA ACGCGTCGGC GCATTGCTGC GCGAAGCGGG CGCGACCGAT
ATCCGCGTTG CGAAGGACGA AGCCGAACGC CAGCGCTTCT GGGCTGGCCG CAAAAATGCG
TTCCCCGCCG TGGGCCGCGT GTCGCCCGAT TACTACTGCA TGGACGGCAC GATCCCGCGC
CGCGAACTGG CGCGCGTGCT GCGCGGCATC GCGGCGCTGT CGGACGAATA TGGCCTGCGC
GTCGCCAACG TCTTTCATGC GGGCGACGGC AACATGCATC CGCTGATTCT CTTCGATGCG
AACGCACCGG GCGAAATGGA GCGCGCCGAA ACGCTCGGCG CGAAGATCCT CGAACTGTGC
GTCGACGTCG GCGGAAGCAT CACGGGCGAA CATGGCGTCG GACGCGAGAA GATCAATCAG
ATGTGCGTGC AGTTCAGCAG CGAAGAACTC ACGCTGTTCC ATTCGCTGAA AGCCGCATTC
GATCCCGACG GCCTGCTCAA TCCCGGCAAG AACATTCCGA CGCTGCATCG CTGCGCGGAA
TTCGGTGCGA TGCATATTCA TCACGGCAAG CTGCCGTTTG CCGAACTGGA GCGCTTCTGA
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| Protein sequence | MSYAYDERID GPLPSHDKAA LVAELQRVMP GMQLLHDRED LRPFECDGLS AYRTTPMMVA
LPDSIEQVQA LLKFAAARKV PVVARGAGTG LSGGALPLEQ GILLVMARFN RILHIDPEAS
IARVQPGVRN LSISQAAAIH GLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNIL
KLEVMTIDGE RLTIGSEALD SPGFDLLALL AGSEGMLGIV TEVTVKLLTK PQSAKVLLAS
FDDVEKAGAA VARIIGAGVI PGGLEMMDNL AIRAAEDFIH AGYPVDAEAI LLCELDGAES
DVQEDCERVG ALLREAGATD IRVAKDEAER QRFWAGRKNA FPAVGRVSPD YYCMDGTIPR
RELARVLRGI AALSDEYGLR VANVFHAGDG NMHPLILFDA NAPGEMERAE TLGAKILELC
VDVGGSITGE HGVGREKINQ MCVQFSSEEL TLFHSLKAAF DPDGLLNPGK NIPTLHRCAE
FGAMHIHHGK LPFAELERF
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