| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7212 |
|---|
| Symbol | |
|---|
| ID | 6248721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1867522 |
|---|
| End bp | 1870719 |
|---|
| Gene Length | 3198 bp |
|---|
| Protein Length | 1065 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642598856 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001863258 |
|---|
| Protein GI | 186471940 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.407199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATCG TCAAACTGGC CCTGCGGCGG CCTTACACTT TCATCGTGCT GGCCGTGCTG
CTCTTCATCG TCGGGCCGCT CGCGATCCTG CGCACGCCGA CGGATATCTT CCCGAACATC
GACATTCCCG TCGTCAGCAT CGTGTGGTCG TATAACGGTT TTTCCGCCGA AGACATGGCG
CACCGGATCA CGTCGAACTA CGAGCGCGCG CTCACCACCG ACGTCGACGA TATCGAACAC
ATCGAATCGC AATCGCTCAA CGGCGTCTCC GTCGTGAAGG TGTTCTTTCA TCCGGGCGCG
GACATCAACC GCGCGATCGC CGAGGCTGCG TCGAACTCCG CGTCGATCCT GCGCGTGCTG
CCGCCCGGCA CGCTGCCGCC GAACATCATC ACGTACAACG CATCGACGGT GCCCGTGCTG
CAACTGGGCT TGTCCAGCAA CACGCTGCCC GAACAGACGC TTTACGATCT CGGCAACAGC
TTCATCCGCA CACAACTCGC GACGATCCAG GGCGCAGCCG TGCCCTTGCC CTATGGCGGC
AAGATCCGCC AGATCATGGT CCTGCTCGAT CCGAAAGCGC TGCAGGCGAA GGGTCTCGCA
CCCGCCGACG TGGTCAACGC GGTCAACGCG CAAAACCTGA TTCTGCCGGG CGGCACCGCG
AAGATCGGCT CGCGCGAATA CAACGTCGAG ATGAACGGCA GCACGAGCAC CGTCGCTGCA
CTCAACGATC TGCCCATCAA GACGGTCAAC GGCAGCGTCG TCTATGTGCG CGACGTTGCG
CATGTGATCG ACGGCTACGC GCCGCAAACG AATATCGTGC GTAGCGACGG CAAGCGCGCC
GCGTTGCTGC AAATCGAAAA GACGGGCAGT GCGTCGACAC TGACCATCAT CCAGCAAGTG
AAAGCGATGC TGCCGAAGAT CGCCGCGGGC CTGCCGAGCG CACTGAAGAT TACGCCGCTC
TCCGATCAGT CCGTGTTCGT GAAGTCGGCG ATTTCGGGCG TCGTGCGCGA AGCGCTGATC
GCCGCATGCC TGACGGCCGC AATGATCCTG CTGTTTCTCG GCAGCTGGCG CGCAACGCTC
ATCATCGCGG TGTCGATTCC ATTGGCCGTG TTGACGTCGC TGATTGCGCT GGCCGCGCTC
GGGCAGACCA TCAACATCAT GACGCTCGGC GGACTCGCGC TCGCGGTCGG CATTCTCGTC
GACGATGCGA CTGTGGCAAT CGAAAACATC ACGCATCACC TCGAAAAAGG CGCGCCGCTG
CACGATGCGA TCCTGAACGG GTCCGGCGAG ATTGCCGTGC CGACCTTCGT CTCGACGCTG
TCGATCTGCA TCGTATTCGT GCCGATGTTC CTGTTGTCGG GTGTCGCGCG GTATCTGTTC
GTTCCGTTGG CGGAAGCCGT CGTGTTCGCG ATGTGCGCGT CGTACTTTTT CTCGCGCACG
CTTGTCCCGA CCCTCGCGAT GTATCTGATG CGCGTGCCTT CGAAGAACGG ACGCGCTGCG
CAGGGACGCT TCGCGATCTT CGCGCGCTTT CAGGCACGCT TCGAGCATCG CTTCGACATC
CTGCGCAACG GTTACCACGA CGTGCTGCAA CGCGCGGTCG CGAATCGCCG CCGGTTCATT
CCCGTCTATC TCGCGCTGTG CTTCGCATCG CTCGCACTGA TTCCGTTTGC AGGCCGCGAC
TTCTTTCCTG CCGTCGACAC CGGCGAAATC CGTTTGCATC TGCGCGCCCC GACGGGCACG
CGCATCGAGC AGACGGCGCG CATCACCGAT CAGGTCGAAG CGAAAATCCG CAGCGTGATT
CCGAAGCCGG AACAGGCCGC CGTGCTCGAC AACATCGGCG TGCCCGTGAG CGGCATCAAT
CTGACATACG ACTCGGCGGA CCCGATCGGC CCTGAAGACG CGGACATCAT GGTCACGCTC
AAGCCCGATC ACAAGCCGAC GGCGCAATAC GTCGCACAGT TGCGCAACGT GCTGGCGCAG
GCGTTTCCCG GCGTGACATT CGCGTTTCTG CCTGCCGATA TCGTCAGCCA GATTCTGAAC
TTCGGCCTGC CCGCGCCGAT CGACGTGCAG ATCGTCGGCA ACAAGCTCGA TCAGAACCGT
GTCGTCGCGG ACAAGTTGCT GGCGCAAATG CGCGGCGTGC GCGGTCTTGT CGATGCCCGC
CTCCAGCAGC CTGGCGACGA ACCGGCCATC GACGTCAATG TCGATCGTAC GAAGGCGATC
CAGGCGGGCC TCACGCAAAG AGACGTCGCG CAGAACATGC TGATCGCGCT CTCGGGCAGT
TCGCAGACCA CGCCGAATTT CTGGCTCGAT CCGAAGAACG GCGTCAGCTA TCCGTTGGTG
ACGGAGATGC CGCAGTACGA CATTCACTCG CTGCAAACGC TCAGCAACAT TCCGCTGACC
ACCAACCGGG TGGGCGTCGA TCCGCAGAAT CAGCTGGGCT CGCTCGGCAC GACGTCGCGC
AGCATGCAGC AGGCCGTCGT ATCGCATTAC AACGTGCAAC CCGTGCTCGA CATATTCGCG
TCAACGCAAG GACGCGACCT GGGCAGCGTC GCTTCTGACG TAACGAAACT CGTCGACGCC
GCGCGCACGC AGTTGCCGGC CGGCTCGTCC ATTGTGATTC GCGGACAGGT GCAGTCGATG
AACGAATCGT TCGTAGGCCT CGGCTACGGT CTCGTGTTCG CCATCGCCCT CGTCTATCTG
CTGATGGTGG TGAATTTCCA GTCGTGGCTC GATCCGCTCA TCATCGTCAG CGGCTTGCCA
GGCTCGCTCG CGGGCATTGC GTGGATGCTG TTCGCCACGC ACACGACGCT GAGCGTACCT
GCGTTGACGG GCACGATTCT GTGCATCGGC ATCGCAACGG CCAACAGCAT TCTCGTCATC
AACACCGCTC GCGAGTCGCT CGCCAACGGC ATGGAGCCGC TCGCGGCCGC GCTCGATGCA
GGCTTCAACC GCTTCCGCCC GGTGCTGATG ACGGCGCTCG CGATGCTGAT TGGCATGCTG
CCGATGGCGC TCGGCCTCGG CGACGGCGGC GAGCAGAATG CGCCGCTCGG CCGCGCGGTG
ATCGGCGGCC TCGCGATCGG CACAGTGTCG ACGCTGATGT TCGTACCCGT CGTATTCGGC
ATGGTGCACG CGTGGCTCGC GAAACGCCGC GCGAAGAATG CCGCCGATCA CGCCGACATG
ACCACACACG CCCAATAA
|
|---|
| Protein sequence | MWIVKLALRR PYTFIVLAVL LFIVGPLAIL RTPTDIFPNI DIPVVSIVWS YNGFSAEDMA
HRITSNYERA LTTDVDDIEH IESQSLNGVS VVKVFFHPGA DINRAIAEAA SNSASILRVL
PPGTLPPNII TYNASTVPVL QLGLSSNTLP EQTLYDLGNS FIRTQLATIQ GAAVPLPYGG
KIRQIMVLLD PKALQAKGLA PADVVNAVNA QNLILPGGTA KIGSREYNVE MNGSTSTVAA
LNDLPIKTVN GSVVYVRDVA HVIDGYAPQT NIVRSDGKRA ALLQIEKTGS ASTLTIIQQV
KAMLPKIAAG LPSALKITPL SDQSVFVKSA ISGVVREALI AACLTAAMIL LFLGSWRATL
IIAVSIPLAV LTSLIALAAL GQTINIMTLG GLALAVGILV DDATVAIENI THHLEKGAPL
HDAILNGSGE IAVPTFVSTL SICIVFVPMF LLSGVARYLF VPLAEAVVFA MCASYFFSRT
LVPTLAMYLM RVPSKNGRAA QGRFAIFARF QARFEHRFDI LRNGYHDVLQ RAVANRRRFI
PVYLALCFAS LALIPFAGRD FFPAVDTGEI RLHLRAPTGT RIEQTARITD QVEAKIRSVI
PKPEQAAVLD NIGVPVSGIN LTYDSADPIG PEDADIMVTL KPDHKPTAQY VAQLRNVLAQ
AFPGVTFAFL PADIVSQILN FGLPAPIDVQ IVGNKLDQNR VVADKLLAQM RGVRGLVDAR
LQQPGDEPAI DVNVDRTKAI QAGLTQRDVA QNMLIALSGS SQTTPNFWLD PKNGVSYPLV
TEMPQYDIHS LQTLSNIPLT TNRVGVDPQN QLGSLGTTSR SMQQAVVSHY NVQPVLDIFA
STQGRDLGSV ASDVTKLVDA ARTQLPAGSS IVIRGQVQSM NESFVGLGYG LVFAIALVYL
LMVVNFQSWL DPLIIVSGLP GSLAGIAWML FATHTTLSVP ALTGTILCIG IATANSILVI
NTARESLANG MEPLAAALDA GFNRFRPVLM TALAMLIGML PMALGLGDGG EQNAPLGRAV
IGGLAIGTVS TLMFVPVVFG MVHAWLAKRR AKNAADHADM TTHAQ
|
|---|
| |