| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7192 |
|---|
| Symbol | |
|---|
| ID | 6248701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1843745 |
|---|
| End bp | 1845472 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642598836 |
|---|
| Product | methanol/ethanol family PQQ-dependent dehydrogenase |
|---|
| Protein accession | YP_001863238 |
|---|
| Protein GI | 186471920 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.426546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.582027 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA GTCCGGCTTC CGCCACGCGG CTCGCGATGC TCGTCGCGGG CGTCGTGGCG
GCAATCAGTC TGGAGCCCGC GACGGCAGCC GCCGCGGCCG ACTATCCGCC CGTGACCTAC
GACCGGCTCA CGTCGGCGCA AAGCGATCCC GGCTGGCTCA CGTATTACCG CACCTACAAC
GGCCAGGCGC ATTCGCCGCT CAAGCAGATC GACACGTCGA ACGTGAAGAA CCTGAAGCAG
GCGTGGGCGT ACAAGTTTCC GGCGGACCTT CAGCAAGGCT TCGAAGCGAC GCCCATCATC
AACGGCCGCT ATCTGTTCGT GACGACGCCC AAGGACAACG TCTATGCATT CGATGGCGCC
ACCGGCAAGC AACTGTGGAA GTACGAACCG AAGCTCGGCG CCGAAGCGTT TAAGAACGCG
TGCTGCGATG TCGTGAATCG CGGCGTCGCA CTCTATGGCA AGAACGTGTA TGTCGCGATG
CTGAACGGCG AAGTGACCGC GCTCGATGCA CAAAGCGGCG CCGTCGTGTG GAAAAAAGCG
ATGTTCGAGC CGGCCACGGG CTACGCGTTC TCGCTTGCGC CGCTTGCCCT TGACGGCGCA
CTCGTGGTCG GCAGCTCGGG CGGCGAGTAT GGCGCGCGCG GCTTCATCGC GGCGCTCGAC
CCCGAGAACG GCAACGTGCA ATGGAAGCGC TACACCGTGC CCGGCGCGAA GGAGCCGAAC
GGCAATACGT GGCCCGACGG CATGCAGGAA CATGGTGGCG CACCGGCGTG GCTGACGGGC
ACCTATGACC CGCAGAGCAA GACGCTCTAT TGGGGCGTCG GCAATCCCGG ACCGTGGCTC
GCCGATCTTC GTCCCGGCGA CAACCTCTAT TCAGACTCGC TGCTCGCACT CGATCCCAAG
ACCGGCAACC TCAAATGGCA CTACCAGTAC ACGCGTCACG ACACCTGGGA CTACGACGGC
GTCAACACAC CCGTGCTCGC GAACATCAAG TACGACGGCA AGGACTATGA CGCGATCATC
CACGCGGACC GCAACGGCTA TTTCCACGCG ATCGACCGCA GCAACGGCAA GCTGATCTAC
GCGCGCCCGT TCGTGAAGGC CACCTCCGTC ACGGGCTACA CCGCGGACGG CAAACCCGTC
CAGGACGAAT CGAAGTATCC GAAGACGGGC ACGACGATCG AGACCTGCCC AAGCTTTCTC
GGCGGCAAGA ACTGGTGGTC GGTATCCTAC GACGCGGACA AGCACATCGC GATCATCCCC
ACGCTGCACG CGTGCATGTC GCTGTCGGGT AAATCGGTCA CGTACATGGA AGGTCTGCCG
TATCTCGGCG AAGGCTTCGA GATCAAGCCC GAACCGGGCA GCAAGGGTTA TGGCGAGCTT
CAGGCCATCG ACGTCAACAC GGGCAAGCAG CTCTGGAGCC ATTGGAGCAA GCTGCCGTGG
AACGGCGGCG TAGCGACGAC GGCGAGCGGC CTGGCGTTCA GCGGCTCGCT CGACGGACAC
CTGTATGCGT TCGACGTGAC GAACGGCAAG GTGCTGTGGC AAAGCCCGAA GCTCGCGAGC
GGCATCATCG CGCAGCCGTC GGTGTTCGAG ATCGACGGCA AGGAATATGT CGCGGTGCTG
GCGGGCTATG GCGGCGCGAA TCCCATCTGG GGCGGCCCGA TGGCCAAGGC CGCCGACAAG
GTGCCGCGCG GCGGAACGCT GTACGTGTTC GCGCTCAACC ATTCGTGA
|
|---|
| Protein sequence | MKTSPASATR LAMLVAGVVA AISLEPATAA AAADYPPVTY DRLTSAQSDP GWLTYYRTYN
GQAHSPLKQI DTSNVKNLKQ AWAYKFPADL QQGFEATPII NGRYLFVTTP KDNVYAFDGA
TGKQLWKYEP KLGAEAFKNA CCDVVNRGVA LYGKNVYVAM LNGEVTALDA QSGAVVWKKA
MFEPATGYAF SLAPLALDGA LVVGSSGGEY GARGFIAALD PENGNVQWKR YTVPGAKEPN
GNTWPDGMQE HGGAPAWLTG TYDPQSKTLY WGVGNPGPWL ADLRPGDNLY SDSLLALDPK
TGNLKWHYQY TRHDTWDYDG VNTPVLANIK YDGKDYDAII HADRNGYFHA IDRSNGKLIY
ARPFVKATSV TGYTADGKPV QDESKYPKTG TTIETCPSFL GGKNWWSVSY DADKHIAIIP
TLHACMSLSG KSVTYMEGLP YLGEGFEIKP EPGSKGYGEL QAIDVNTGKQ LWSHWSKLPW
NGGVATTASG LAFSGSLDGH LYAFDVTNGK VLWQSPKLAS GIIAQPSVFE IDGKEYVAVL
AGYGGANPIW GGPMAKAADK VPRGGTLYVF ALNHS
|
|---|
| |