| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7185 |
|---|
| Symbol | |
|---|
| ID | 6248695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1838328 |
|---|
| End bp | 1839059 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642598830 |
|---|
| Product | 17 kDa surface antigen |
|---|
| Protein accession | YP_001863232 |
|---|
| Protein GI | 186471914 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3133] Outer membrane lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000025224 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA ATGTCACGAA CAGCACTTCG CAACGTAGCC GTATCCATCC CTTGATCGCA
GGCGCGGCTG TGTCCGTGAT CCTCGCCAGC GTCACAGGCG TCGCGGCCAT GACGGGCATC
CTGCCCGTTT CGCACGCGGT GCAGCCGCCC GCTGCGCAGA TCGCGCCCGT CGCCGCGCAG
GCCGCCAGCG CGCCGCTCGC TACCGTCGAG CCAGCGAACG CCACGGCTCA GCAAACGGGC
GCGGTCCAGC AGCCGAGTGC GGCGCAACCC GTCGCCCAGC AAGCGGCACC CGCTGCGCCG
CGGCCCGTTC ATCACACGCG CAAGCCGTCG GTCGCGCCCG CACCGCAGTA CGCGAACGGC
AACTATGCGC AATCGGCCGG CGCACGCCAG GTTGCCGCCG ATCCCTATGC GGGTGAAGTC
GTCGCGATCA ACCCGGTGCA AACGTCAGAG CCGACCACGG GACTCGGCGC CGTCGGTGGC
GCGGTCGCGG GCGGTTTGAT CGGCAATCAG TTCGGCGGCG GACACGGACG CATCCTTACC
ACCATCGCGG GCGCGGTGGG CGGCGGTCTC GCGGGCAACG GCATCGAACA TGCGGTGCGC
AAGCAGACGA GCTATCAGGT ACAGGTGCGC ATGCAGGACG GCAGCTATCG CAACTTCACT
TATGCGACTG AACCGCAGGT GCAGGTCGGA CAACGCGTGC ACGTATCCGG CGACACGCTC
ACGGCTTCGT GA
|
|---|
| Protein sequence | MNANVTNSTS QRSRIHPLIA GAAVSVILAS VTGVAAMTGI LPVSHAVQPP AAQIAPVAAQ
AASAPLATVE PANATAQQTG AVQQPSAAQP VAQQAAPAAP RPVHHTRKPS VAPAPQYANG
NYAQSAGARQ VAADPYAGEV VAINPVQTSE PTTGLGAVGG AVAGGLIGNQ FGGGHGRILT
TIAGAVGGGL AGNGIEHAVR KQTSYQVQVR MQDGSYRNFT YATEPQVQVG QRVHVSGDTL
TAS
|
|---|
| |