Gene Bphy_7056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_7056 
Symbol 
ID6248570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1719759 
End bp1720940 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content68% 
IMG OID642598705 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001863107 
Protein GI186471789 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.370606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGACG CTGCCCTGTC CTCTTCCAGC GCCGTGCGCG AAGCCGACGT GCTGGTGATC 
GGCGGCGGGC TGCACGGTTC GAGCAGCGCG TTCCATCTGG CCGCGCGCGG TGCGAGCGTG
ATCGTGCTCG AAGCCGACTA CGTCGCGCGG CATTCGTCGG GCGTCAATGC GGGCGGCGTG
CGCACGCTCG GCCGGCCGCT GCCCGAGATT CCGCTCGCGC TGATGTCGCG CGAAATCTGG
CATAGCCTGC GGGAAACGAT CGGCGACGAC GGCGGCTTCG TGCCGTCCGG CCAACTGAAG
ATCGCCGAAA CGAAAGCCGA ACTCGACGAG TGCCGCGCCC GCGTCGCGCT ACTCGAAGCG
CACGGCTTCA CGCACGAAAA ACTGATCGAC CGCGCGAGTG TGCTCGAACT CGAGCCTGCA
CTCGCGCGCC ATGTGACGGG CGGCATCTGG GTCGAGCGCG ACGGCTATGC GCTGCCGTTC
AAGACTACCA CCGCCTTCCG GCTCGCCGCG CAGCGGCATG GTGCGGCGTT TTTCGAAGGC
TCGCCCGTCA GCCGCATCGA ACAGCGCGGC ACGCGCTGGT TCGCGCGGAC GCCGCGCGGC
GAGTTCAGCG CGCAGAAACT CGTCGTCACG GCGGGCGCGT GGGCGGGACA ACTGGCCGAA
CAGGTGGGTG AATGCGTGCC CGTGCATCCC GAAGGGCTGA TGCTGATGGT CACGCATCGC
GTCGCGCCGT TCTGCCGCGC GACGCTGGGT GCAACGGGGC GTCCGTTGTC TTTCAAGCAG
TTCGACAACG GCACAGTCGT GATCGGCGGC AAGCTGATCG GTATCGCCGA TCTGCACGGC
CGGCATGGTG AAGTCGATTT CGCGCGGCTC GTGCGCAGCG CCAATACCGT CGTCGATCTC
TTTCCGCATT TGCGGCATCT CGGTGTGAAC CGCGCGTGGG CGGGCGTCGA AGCATTCACC
GACGATGCAC TGCCCGTGAT CTCGCCAAGC CGCCGCGCGT CGGATCTCGT CTATTCGTTT
GGCTATTGCG GCAGCGGTTT CCAGCTCGGA CCGGCCTGCG GGCGGCTCGT GTCCGAACTC
GTGCTCGACG GCAAGGCTTC GCTGCCGCTC GACGACTTCG CAATCGACCG CTTTACGCGC
CAGCCCGTGC CGCAGCAGAC GGCCAGCGCC GACGCGCACT GA
 
Protein sequence
MNDAALSSSS AVREADVLVI GGGLHGSSSA FHLAARGASV IVLEADYVAR HSSGVNAGGV 
RTLGRPLPEI PLALMSREIW HSLRETIGDD GGFVPSGQLK IAETKAELDE CRARVALLEA
HGFTHEKLID RASVLELEPA LARHVTGGIW VERDGYALPF KTTTAFRLAA QRHGAAFFEG
SPVSRIEQRG TRWFARTPRG EFSAQKLVVT AGAWAGQLAE QVGECVPVHP EGLMLMVTHR
VAPFCRATLG ATGRPLSFKQ FDNGTVVIGG KLIGIADLHG RHGEVDFARL VRSANTVVDL
FPHLRHLGVN RAWAGVEAFT DDALPVISPS RRASDLVYSF GYCGSGFQLG PACGRLVSEL
VLDGKASLPL DDFAIDRFTR QPVPQQTASA DAH