| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7029 |
|---|
| Symbol | |
|---|
| ID | 6248544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1695251 |
|---|
| End bp | 1696270 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642598679 |
|---|
| Product | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit |
|---|
| Protein accession | YP_001863081 |
|---|
| Protein GI | 186471763 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.516875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.844849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCG ACCATCCCGC ACCTCTGCCG CCGTCCGGCG CCGTTCCCTA TGAGAAAGAC
TTCTCGCTCC GGTTGTTGCG CGACATGCTG CGTGTGCGAC GGTTAGAGGA GAAATGCGCC
GAACTTTACG GCGCCGGCAT GATTCGCGGC TTTTTGCATC TGTATATCGG CGAAGAGGCA
ACCGCAGTGG GCGCGCTTCA TGCGCTCGCT TCCGACGACA ACATCGTCGC GACGTACCGT
GAACATGCAC ATGCGTTGGT ACGCGGTATG GACATGGGTG TGCTCATGGC GGAAATGTAT
GGCAAGTACG AAGGCTGCGC CCACGGACGA GGTGGATCGA TGCATCTCTT CGATCGAACG
AGGCGGCTGT TCGGCGGCAA TGCAATCGTC GGCGGCAGTC TACCCCTCGC TGTCGGACTG
GCCCTTGCGC AAAAGATGCA GGGCAGCCAG GGCATCACCG CATGCTTTTT TGGCGACGGC
GCAGTAGCCG AAGGCGCCTT TCATGAATCG ATGAATCTCG CTGCATTGTG GAAATTGCCC
ATTCTTTTCT GCTGCGAAAA CAACCTGTAC GCAATGGGGA CGGCTATCGA GCGAAGCCAG
TCACAGACGG ATCTCTGCGC CAAGGCCGCT GCATATAACG TTCCGGCGCG CAGCGCGGAT
GGAATGGATG TCGTGTCGGT ACACGACGCC ACGAGCGAGG CCGTCGCGTG TGTACGAACC
GCACAGAATC CGCTCTTTCT CGAATTCAGG ACCTACCGGT TCCGCGCGCA CTCGATGTAC
GACGCCGAAC TGTACCGCCA GAAGGCTGAG GTCGAGCAAT GGAAGACGCG CGGTCCGATC
CACACCTTTA CCGCCCGTTT AAAGGACGAG GGTAAGTTAT CTGAGGACGA GTTCCTCGCG
CTTGACGCAG CGGCTCTGGC GGAAGTCGAG CATGCCGTGG CATTCGCGGA GGCGGGCACA
TGGGAGCGTG CCGAAGATCT CCTGACCGAT CTCTACACGG CAACGGGGCA GACGACATGA
|
|---|
| Protein sequence | MTIDHPAPLP PSGAVPYEKD FSLRLLRDML RVRRLEEKCA ELYGAGMIRG FLHLYIGEEA
TAVGALHALA SDDNIVATYR EHAHALVRGM DMGVLMAEMY GKYEGCAHGR GGSMHLFDRT
RRLFGGNAIV GGSLPLAVGL ALAQKMQGSQ GITACFFGDG AVAEGAFHES MNLAALWKLP
ILFCCENNLY AMGTAIERSQ SQTDLCAKAA AYNVPARSAD GMDVVSVHDA TSEAVACVRT
AQNPLFLEFR TYRFRAHSMY DAELYRQKAE VEQWKTRGPI HTFTARLKDE GKLSEDEFLA
LDAAALAEVE HAVAFAEAGT WERAEDLLTD LYTATGQTT
|
|---|
| |