| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6985 |
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| Symbol | |
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| ID | 6248500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1636633 |
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| End bp | 1637355 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642598635 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001863037 |
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| Protein GI | 186471719 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.622765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC GAACGTTTTT GGTCACAGGC GCCAGCAAAG GTATCGGGCG CGCGCTGTCA
CACCGGCTCG CCGCCGATGG ACATCAGGTC ATCGGTCTTG CACGCGGGGC CGACGACCCG
AGTTTCCCCG GCACTCTGGT TTTCGTCGAT CTGACCGATC GCAACGCGAC GACACGAACG
CTCGAGGGCC TGGTCGGCTG TTATACCTTC GATGGCGTCA TCAACAACAC GGGGTTCGTC
CGTCTGGCTG GCGTTGAAGC GGTTGATCTC GACGACCTCG AAGCGTCCTT CCGCCACAAT
CTCACCTCTG CCGTGCAGAC CGTGCAAGCC TTGCTACCGG GAATGCGGGA GCGTGGTTGG
GGGCGAATCG TCAATCTCTC GAGCCTCGTC GTGCTTGGCG TCGCGAACCG CACCGCCTAC
GCGGCGGCGA AAGCCGCGAT GATGAGCTTC ACGCGCACCT GGGCGCTGGA GCTTGCGCAG
ACCGGCATTA CCGTCAATGC CGTCGCGCCC GGGCCCACCG AGACCGAACT GTTCCGGCAG
AACACACCCA TCGGCAGCGA AGCGGAGCAG CGCTTTCTGT CGCTTGTGCC GATGAAGCGA
TTCGGCAAGC CTGAGGAATT GGCCGCGTCC GTGGCGTTTC TTCTGTCAGA GGATGCGGGC
TTTATCACTG GACAGACGGT GTTCGTTGAC GGTGGTGCGT CGGTAGGGAA GGCGGCATTC
TGA
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| Protein sequence | MPKRTFLVTG ASKGIGRALS HRLAADGHQV IGLARGADDP SFPGTLVFVD LTDRNATTRT
LEGLVGCYTF DGVINNTGFV RLAGVEAVDL DDLEASFRHN LTSAVQTVQA LLPGMRERGW
GRIVNLSSLV VLGVANRTAY AAAKAAMMSF TRTWALELAQ TGITVNAVAP GPTETELFRQ
NTPIGSEAEQ RFLSLVPMKR FGKPEELAAS VAFLLSEDAG FITGQTVFVD GGASVGKAAF
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