| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6978 |
|---|
| Symbol | |
|---|
| ID | 6248493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1629142 |
|---|
| End bp | 1629969 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642598628 |
|---|
| Product | peptidase C26 |
|---|
| Protein accession | YP_001863030 |
|---|
| Protein GI | 186471712 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.788826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATG AGATGCAGGA TCGACCTCTC GTTGGCGTGG TGTGCGACCG GTTCTTCGCC
GGCGAACACG ATCTGCACGG CGCGAAGCAC AGCTATGTCC GCGCGCTAAT GTCAGGCGCA
AACGTGAGCC CCGTGCTGAT TCCCGCCACG CGTGATCTGG TAGCGTTTGA CGTATATCTC
GATACCGTGA ATGGATTGCT GTTTCCAGGC GGCGCGTCGA ATGTTGAAGC GCACCGTTAT
CGCAGTCAAG GAAACGCCGA CATGCTCGTC GATCCCGACC GCGACCACGT TGCGCTCGGG
TTGATGCAGG CTGCGGCCTC GCGAGGTATG CCTGTCCTTG CAATCTGCCG CGGCTTTCAG
GAGATGAACG TCGCTTTCGG CGGCACGCTG TATACGGATG TCCACGCGTG CGGACATTCG
GAAGATCACC TCGAAGATCC CTCGGAAGAA TTGCACACGC GCTATCGCTA CCGCCACGAC
GTCGAACTCG CGCCAACGGG CATGCTCGCG ACGCTCGCCC ACGCCCAACG CGTTCGCGTG
AATTCGCTGC ACCGTCAGGG CGTGGCGAAG CTCGCGCCAC GGCTGGTCGT CGAAGCGCGC
ACCCCCGACG GATTGATCGA AGCGTATCGA CTGGACGGAC ACCCGTTTGC GCTCGGCGTG
CAGTGGCATC CCGAAGTGAT GCTGGAAGAC GATGCATTGT CGCGTGCACT GTTTGCAGCG
TTCGGCTCGA ATTGCCGCCG TTATGGGCGC GAAAACGCAA CACGCAATAC AACCCGCAGG
TGCACATCAA AAGGCGTTGA ACCATGTCAG CCGACCGCAT TGACCTGA
|
|---|
| Protein sequence | MADEMQDRPL VGVVCDRFFA GEHDLHGAKH SYVRALMSGA NVSPVLIPAT RDLVAFDVYL
DTVNGLLFPG GASNVEAHRY RSQGNADMLV DPDRDHVALG LMQAAASRGM PVLAICRGFQ
EMNVAFGGTL YTDVHACGHS EDHLEDPSEE LHTRYRYRHD VELAPTGMLA TLAHAQRVRV
NSLHRQGVAK LAPRLVVEAR TPDGLIEAYR LDGHPFALGV QWHPEVMLED DALSRALFAA
FGSNCRRYGR ENATRNTTRR CTSKGVEPCQ PTALT
|
|---|
| |