| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6936 |
|---|
| Symbol | |
|---|
| ID | 6248455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1580771 |
|---|
| End bp | 1582375 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642598590 |
|---|
| Product | peptidase S53 propeptide |
|---|
| Protein accession | YP_001862992 |
|---|
| Protein GI | 186471674 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4934] Predicted protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAT ACGTTCCGCT GCCCGGAAGC CAGAAAAACG TGTTACCGAA CTCGCGACTC
GCAGGACCCG TCGATCCGTC GACCCTGGCA AGCGTCACCG TGCGAATTCG ATCGGTTAGC
GACCCCGCCA CGCTAGTTCA AAAGGCGTAT GAACTTGCGA AAACTCCGCT TGCGGATCGC
AAATACCTAA CGCACGAAGA ACTGGCCGAG CAGCACGGTG CAAGCAAAGA AGATCTCGAC
ATGATTGAGC ACTTCGCTCA GCAACATGAC CTCAAGGTAG CCCATCGAAG TGCAGGCGAG
CGCGCCGTTG TGTTGCAAGG CAGACTAGGC GATCTGCTCG GAGCCTTTCA TGCAGATGTG
CAGATGTACC ACCACGCTGC AGGCACATAC CGCGGAAGGC GAGGCGAGAT TTCGCTGCCA
CAGGAATTAA GCAAGATCGT CACGGGCGTA TTCGGCTTCG ACACACGTCC AAAGCATCGA
GAACCACATC GCCAGAAAAG CGCGGCGCAG AATGGGCCGG GCAATGGTAA CGGCGTGGCT
GCAACGGTGT TCGCAAAGCG CTACAACTTC CCGCCACAAC TGGACGGTAC CGGACAAACC
ATTGGGATCA TCGAACTCGG TGGAGGTTAT CGGAGAAGCG ATCTCAACGC GTTCTTCAAG
GAGATCGGCG TGCCGACGCC GCAGGTGTCA TCCGTTTCGA TTGACCACGC TGGTAATCAT
CCGTCTACGC CGGACTCTGA CGATGGGGAG GTAATGCTCG ACATCGAAGT TGCAGGTGCA
GTGGCGCCCA AAGCCAAATA CGTCGTGTAC TTTGCGCCTA ATATCGGCGA TCAAGGCTTC
CTGGACGCAA TCAGCGCTGC AGTCCACGAT TCAGAAAGAA AACCTTCCGT GATATCTATC
AGCTGGGGCA GTCCCGAGGT CTCGACGGAC GAGCAAGGTC TCAAAGCCTA TCACGAGCTT
TTCGCCGCGG CGGCTTCGCT GGGGATTACC GTGTGTGCGG CATCGGGCGA TCATGGGACT
GCCAATCTGG ACGCTGGCCA CTGGGACGGC AAGATTCACG TGAACCATCC TGCTTGTGAC
GACCTTGTGC TCGGATGCGG CGGGACGCAG ATCACGGGCG GCAGGGACGT CGTATGGAAC
GACGGCACAC CGTTCAACGT CAACGTGCAA GGCGGTGGCG GATGGGCAAC CGGGGGCGGA
GTCAGCGCGG CTTTTCCAGT ACCGGCCTAT CAAAAGAATG CAGGCATCGA TCCCGTGTCG
ATTGACTCTG GGACGGCAGG CCGCGGCGTT CCAGACATTG CGATGAGTGC GACGAACTAC
TTTACGCGTG TCGATACCTC AGAAGGACCG TCGGGCGGGA CCAGCGCCGT CGCGCCGTTG
ATGGCTGCCC TTGTCGCTCA GCTTAACCAG GGCAAGGCGA AGAACGTGGG CTTCCTGAAT
CCGTTCCTGT ACGCGAACGC GTCAAAGGGC ATCTTTAATG ATGTGACGTC TGGAACCAAT
GCCATCAAGA ACACAATCAA GGGGTACCAA GCGGCCAGTG GCTGGGACGC ATGTACAGGA
CTCGGCACCC CGGACGGCAC GGCGATCCTG AATCACTTGG CGTAA
|
|---|
| Protein sequence | MAQYVPLPGS QKNVLPNSRL AGPVDPSTLA SVTVRIRSVS DPATLVQKAY ELAKTPLADR
KYLTHEELAE QHGASKEDLD MIEHFAQQHD LKVAHRSAGE RAVVLQGRLG DLLGAFHADV
QMYHHAAGTY RGRRGEISLP QELSKIVTGV FGFDTRPKHR EPHRQKSAAQ NGPGNGNGVA
ATVFAKRYNF PPQLDGTGQT IGIIELGGGY RRSDLNAFFK EIGVPTPQVS SVSIDHAGNH
PSTPDSDDGE VMLDIEVAGA VAPKAKYVVY FAPNIGDQGF LDAISAAVHD SERKPSVISI
SWGSPEVSTD EQGLKAYHEL FAAAASLGIT VCAASGDHGT ANLDAGHWDG KIHVNHPACD
DLVLGCGGTQ ITGGRDVVWN DGTPFNVNVQ GGGGWATGGG VSAAFPVPAY QKNAGIDPVS
IDSGTAGRGV PDIAMSATNY FTRVDTSEGP SGGTSAVAPL MAALVAQLNQ GKAKNVGFLN
PFLYANASKG IFNDVTSGTN AIKNTIKGYQ AASGWDACTG LGTPDGTAIL NHLA
|
|---|
| |