| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6918 |
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| Symbol | |
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| ID | 6248438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | + |
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| Start bp | 1562657 |
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| End bp | 1565200 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642598573 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001862975 |
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| Protein GI | 186471657 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.378966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAA CCCCAGACAA CGCAGCCTCA GCAGGCGAGC CAGTGCCGGA GTTTCCTCTC
GCTCCCGACG ATCGGACACA CCGCCGTGTA TCGTCGGCGT GGTTCTCTCT CGCGCGATGG
ACTAAACGCA TTGTCGGCGC TGCCACCGTG TGCTCGTCGG CGGTATTTGT CATCTGGATC
GGCGGCTTGC TTGTCACGTC CACGCTGCGC GAGCGCACGC TCGACCTGCA ACTGCTTTCC
GTTCCTAAGG TTTTGTCGGA CGATGGGTAC ACCTCCTCTG TAGTAACCGC CCAGCTAAGT
GACGCGATCA ATGCAATCTA CAGGAATACG GACGTAAGAG CGAGGCGGTC AGCTCTGGTG
CTGCGCCAAT CACCTCCCGA CATCGCGATC CCGAAGGCCG GCATCTCAAT CGAAGGCCTC
GCTAACTGGA TGCGCGGCAT GTTGCCATCC GGCTGGCGAC ACGACATAAC GGGTGAATTC
ACGCAATCGG GCAACACGCT GACCCTGCGA TTGCGGCTGA ACGGCAACGT GATGTTTTCA
GAATCGGCAA CCGGAGAAAG CGCCGTTGAT ACGCTGATCG AGAAAGGTGC ATCCACATTG
GTCGAAAAAA CGCAGCCTGT GCTGAGCGCA CTGTATTTTT ACTTAGGTCC TCACGATCTC
TCTCGCGCCG AATCGATGAG TGAGCAGATC ATTCAAGCTC CCTCGTCTGA TCGTATGTCC
GTCTCGGTAG CGCATGCGCT GAAGGCGACG ATCGCCGATG AGCGGTATCA CTCTGACCGG
CGCAGCAAAC ACGAACCCGA ACGAATGGCG TACCTCACGA CGGCCATCGC CGAGTGGCGC
GCGGCAATCG CCGCGGCCCC GGACTATCCT GTGGCGCATG TAGGTCTTGG GAGGGAGTGG
CATTCTTTGA TGCAGAACGC CACTGCACTG TCCGAATTTC GTGAGGCGAT CCTGCTGGAC
TCCGGATATT CGCGAGCACA TACCGCGCTT GCAGACGTCT TGGAGGAAAC GGATCGCACG
GACGAAGCGA TTGCGGAGTA CCACATTGCG ATGGCTCATG CGCCGATGGA TGAGGTGCCA
CATGTAGGCC TAGGTAACAT CTTGCATCAT CGAATGCACA AGGAAAGCGA AGCGCTCGCT
GAGTATCAAA TGGCTTCACG TCTCGCTCCC AAAGAAGCCC CACCCCACCA CGGCATCGCA
CATGTCTGGG TCAGTTTGGG GGAGCTGGAT CACGCGATAG CAGAATACAG GCAGGCGATC
AGCCTCGACG TGACGCAAGC CTCAACGCAT AGCGATCTCG GTGAGGCCCT GAGAAGACAG
AAGAAGTTTG ATGAGGCTCT GGCGGAGTTT CGCACGGCGA TGTACCTCGA TCCCGACATG
TCTGGGCCAC ATACCGCGAC AGGTGCCATC CTTTACGATG AGGGTAACCG GGAAGACGCG
CGCGCCGAAT ATCTGACGGC ATTGCGACTC GATCCCACGG ATACCAACGC GCACATCAAT
CTGGGCATCA TGCTGTACGC GCAGGGCAAG ACCGACGAAG CGGAAGCAGA ATTCTTCGCT
GCGTTGGCAG GCGACCCGGG ATCGGCAAAG GTACACAACT CGCTCGCTCT GGTCGATGAA
CGCAGGGGCA AGATGCAGGA AGCCGCAGCC GAGTACCGTA CGGCGATACG ACTTGATCCA
AGCGACGCGG AGCCTCATAA CAATCTCGGC CTTTTGCTGA AAGACGAAGG CCGTGGAGAC
GAAGCGATGG AACATTTTCG GACAGCCATC GCACTTGCGC CGACCTTGGG AGAATTGCAC
AACAGTCTTG GTGGCCTCTG GGAAGATCGA GGCAGAAGCG ACCTCGCCAT TGAAGAATAT
CGTCAAGCGA TTCGTCTCCA GCCGCGCAAC GCAGGGGCAC ATAACAATCT GGGTAATATC
TGGCGAAAGG AAGGGCGGCT CGATGAGGCC GCGGCGGAAT ACCTTGAGGC GCAGCGACTC
GCGCCCGACC TTGGGGAGCC ACACACCGGG CTTGGCGATG TATGGGATGC CCTGGGGCGA
CTCGAGGATG CGATTTCTGA ATACCACGCA GCCATTCGCC TCGATCCTCA CCTTAACGCG
CCACACAACA ACCTCGGCAA TATCTTGGTT AAACAGGGCA AGGCGAACGA AGCAGTGGCC
GAGTATCAAG AGGCGATCCG GCTCGAACCA CGCCTAGCTA CCCAGCATAA TGGCTTGGGC
AATGCATTGC ATGCGCTAGG CAAAGACGAC GACGCCATCG CCGAGTACAA CACTGCAATT
CGGCTCGATC CGATGTCTGT CGATGCGCAT ACTGGACTGG GAATCGTCTA TGGCGCGCAA
GGCAAGAGAG AAGAGGCAGA GGCCGAATAT CAAGTCGCAA TCAGAGTTGC ACCGCGGAGT
GATCTCGCTC ATTACAACCT TAGTCTCATT TATCAGGAAC AGGGTAAGTT TGCCGCCGCC
ACCGCGGAAT ATTGCACGGC GGTGCACTTG AACCCGGATC GGGCGCGGCT GCACCGAGTT
CAGTATCGGT TCGCGGGTTT TTAG
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| Protein sequence | MAQTPDNAAS AGEPVPEFPL APDDRTHRRV SSAWFSLARW TKRIVGAATV CSSAVFVIWI
GGLLVTSTLR ERTLDLQLLS VPKVLSDDGY TSSVVTAQLS DAINAIYRNT DVRARRSALV
LRQSPPDIAI PKAGISIEGL ANWMRGMLPS GWRHDITGEF TQSGNTLTLR LRLNGNVMFS
ESATGESAVD TLIEKGASTL VEKTQPVLSA LYFYLGPHDL SRAESMSEQI IQAPSSDRMS
VSVAHALKAT IADERYHSDR RSKHEPERMA YLTTAIAEWR AAIAAAPDYP VAHVGLGREW
HSLMQNATAL SEFREAILLD SGYSRAHTAL ADVLEETDRT DEAIAEYHIA MAHAPMDEVP
HVGLGNILHH RMHKESEALA EYQMASRLAP KEAPPHHGIA HVWVSLGELD HAIAEYRQAI
SLDVTQASTH SDLGEALRRQ KKFDEALAEF RTAMYLDPDM SGPHTATGAI LYDEGNREDA
RAEYLTALRL DPTDTNAHIN LGIMLYAQGK TDEAEAEFFA ALAGDPGSAK VHNSLALVDE
RRGKMQEAAA EYRTAIRLDP SDAEPHNNLG LLLKDEGRGD EAMEHFRTAI ALAPTLGELH
NSLGGLWEDR GRSDLAIEEY RQAIRLQPRN AGAHNNLGNI WRKEGRLDEA AAEYLEAQRL
APDLGEPHTG LGDVWDALGR LEDAISEYHA AIRLDPHLNA PHNNLGNILV KQGKANEAVA
EYQEAIRLEP RLATQHNGLG NALHALGKDD DAIAEYNTAI RLDPMSVDAH TGLGIVYGAQ
GKREEAEAEY QVAIRVAPRS DLAHYNLSLI YQEQGKFAAA TAEYCTAVHL NPDRARLHRV
QYRFAGF
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