Gene Bphy_6867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6867 
Symbol 
ID6248387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1497917 
End bp1499212 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content65% 
IMG OID642598522 
Productglycine hydroxymethyltransferase 
Protein accessionYP_001862924 
Protein GI186471606 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.592385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGA ACTCGCGCTT TTTCGCAGAA ACGCTTCAGA GCCGCGACCC TGTCATCGCA 
TCGGAGATCG CGCTGGAATT GCGCCGCCAA CAAACCCAGA TCGAACTGAT AGCTTCCGAA
AACATCGTCT CGGCGGCGGT GATGGAGGCG CAGGGCACGG TGCTGACCAA CAAGTACGCG
GAAGGCTATC CGTCGAAGCG CTACTACGGC GGCTGCGAAC ATGCGGATCG CGTCGAGGCG
CTCGCCATCG ACCGCGTGAA GGCGCTGTTC GACGCGGAGT TCGCCAACGT GCAGCCGCAT
TCGGGTGCGC AGGCGAACGG CGCGGTGATG CTCGCGCTCG TCAAACCCGG CGACACGGTG
ATGGGCATGT CGCTCGATGC GGGCGGCCAC CTGACGCACG GCGCGCGCCC CGCGCTGTCC
GGCAAGTGGT TCAACGCGGT GCAATACGGC GTGAGCCCGG ACACGTACCG CATCGACTAT
GACCAGGTGC GCCGCCTTGC CGAAGCACAT CGGCCGAAGC TCATCATCGC CGGCTATTCG
GCCTATCCGC GCGCGCTCGA CTTCGCGGCG TTCCGCGACA TCGCCGATAG CGTCGGCGCG
CTGCTGATGG TGGACATGGC ACATATCGCG GGCATCGTCG CAGCGGGACG GCACGAAAAC
CCGGTGCAGT ACGCGGACGT CGTGACGTCC ACCACGCACA AGACGCTGCG CGGCCCGCGC
GGCGGCTTCA TCCTCACCAA CAACGGCGAC ATCGCGAAGA AGATCAACTC GGCGGTGTTC
CCCGGCTTGC AGGGCGGGCC GCTGATGCAT GTGATAGCGG GCAAGGCCGT TGCGTTCGGC
GAAGCGCTGC GTCCCGAGTT CACCGCCTAT ATCGACCAGG TGCTGCGCAA TGCGCAGGCG
CTCGGCAACG TGTTGAAGTC CGGCGGACTG AGCCTCGTGA CGGGCGGAAC CGACAACCAT
CTGCTGCTCG TCGATCTGCG CTCGAAGCAC CTGACGGGCA CGCAGGCCGA GAAGGCGCTG
GAGCGGGCGG GCATCACCTG CAACAAGAAC GGCATTCCGT TCGATACGGA GAACCCCACG
GTCACGTCGG GCATCCGTCT CGGCACGCCG GCGGGCACGA CGCGCGGGTT CGGTACGGCG
CAGTTCGAGC AGATCGGCGA GATGATTCTA GAAGTGCTGT CGGCGCTCGA ACACGAGCCC
GGCGGCGACG AACAGGTGGA ACGCGCGGTG CGCAGCCGCG TGCGCGACCT GTGCAACCAG
TTCCCCATCT ACTCGCATAC AGAAGCACTC GTATGA
 
Protein sequence
MNENSRFFAE TLQSRDPVIA SEIALELRRQ QTQIELIASE NIVSAAVMEA QGTVLTNKYA 
EGYPSKRYYG GCEHADRVEA LAIDRVKALF DAEFANVQPH SGAQANGAVM LALVKPGDTV
MGMSLDAGGH LTHGARPALS GKWFNAVQYG VSPDTYRIDY DQVRRLAEAH RPKLIIAGYS
AYPRALDFAA FRDIADSVGA LLMVDMAHIA GIVAAGRHEN PVQYADVVTS TTHKTLRGPR
GGFILTNNGD IAKKINSAVF PGLQGGPLMH VIAGKAVAFG EALRPEFTAY IDQVLRNAQA
LGNVLKSGGL SLVTGGTDNH LLLVDLRSKH LTGTQAEKAL ERAGITCNKN GIPFDTENPT
VTSGIRLGTP AGTTRGFGTA QFEQIGEMIL EVLSALEHEP GGDEQVERAV RSRVRDLCNQ
FPIYSHTEAL V