Gene Bphy_6853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6853 
Symbol 
ID6248374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1479657 
End bp1480949 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content57% 
IMG OID642598509 
Productmajor facilitator transporter 
Protein accessionYP_001862911 
Protein GI186471593 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.854567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTTG ACTCATTCGA CAACACGCTG TCGAGTTCGG TTCTAGCTGC GATGCTCAAG 
AGTGGTTGGT CGACGCTGCA GATGAATTCC ATTTTCATGT CTGCCACGTT TATCGGCTTG
ACGATTGGCG CCGCGCTTGC AGGTTGGTTG AGTGACAAAT TTGGGCGCCG GTTTGCGTAC
CAGTTCAACC TCGCAATTTT CGGCGGAATG GCACTTTTGT CCTCCCTTGC CCCGTCAATG
CCCTGGCTCA TCGCGGCGCG CTTCATTATG GGGATTGGGA TGGGAGCGGA ATATGTCATG
GGCTACGGGC TCATTATTGA GTTCGTACCG CCGTCGCATC GCGGCAGATA CTTGGGGAAG
TTGGCGCTGA TCGGAGGCTC GGGCGTGTTC GTAACAGCGG TCGTCGCTAC CTTCATCATT
CCAAGGATCG GTTGGCGCCC GATGTTTGTG ATTGGTGGCA TCGGCACCCT TTGGGTCTGG
TGGATGCGCC GTCATCTTCC CGAGTCGCCT CGTTGGTTGG AACGCGTGGG GCGCCATGCG
GAAGCAGAAC AGATCATGCA GGCAATCGAG AGAGACGCGG GCGTCACCGC ACCGCTTCCC
TCCGCAGCGC AAGCGGCACC CAAGGAGCCG CACTGGGTGC CGCTCTCTAC GCTCTTCTCG
CGAACGGTAA TTCGACGTAC TTTGCTTGCG ATTGTCGTCA ACGTGGTCTG TCTGTTTGGA
TCGTATAGCC TCACCGGCTG GATGCCTACG TTCTTTATCA AACAAGGCAT GAGCGTTACC
CACTCGCTGG GTTTCAGTGC GGCAATGATG GGTGGCTGGA TCGCAGGACC GCTGTTCCTC
TCCTATGTCT CTGACCGGAT GGGCCGGCGT ACCGCAATCA TGTTGTTTGC TGCTATTTGC
GCGTGTCTCG GAGCGGTCTA CCCGTTCCTC ACATCGGCAA CAACCATCGT CTTGTGTGGC
TTCCTGCTTG TATCGGCCGT GGCGATTTTC CTGACGCTCG GATTGGGCAT GACGCCCGAA
ATGTTCCCAA CGGAATATAG GTTCCGCGGC GGTGGTGTGG CGCAGATGTT TGGGAGGCTT
GGGCTCATCG GTTCGCCGTT CATCGTGCTC GAGCTTTTCA ATAACTTCGG AATCACCGGT
GTTGTGTTTG CAATCTCGGG CGCCTACATC GTCATTGCGA TCCTGATCAT GGTTGCGGGT
ATCGAAACCA ACCAGCAGTC GCTTGAGGCA CTGGAGCCTG AAGAGATATC TGACGCGGAG
GGCGTGCTGC CGCAAACCGC GCCACGACGA TAA
 
Protein sequence
MFFDSFDNTL SSSVLAAMLK SGWSTLQMNS IFMSATFIGL TIGAALAGWL SDKFGRRFAY 
QFNLAIFGGM ALLSSLAPSM PWLIAARFIM GIGMGAEYVM GYGLIIEFVP PSHRGRYLGK
LALIGGSGVF VTAVVATFII PRIGWRPMFV IGGIGTLWVW WMRRHLPESP RWLERVGRHA
EAEQIMQAIE RDAGVTAPLP SAAQAAPKEP HWVPLSTLFS RTVIRRTLLA IVVNVVCLFG
SYSLTGWMPT FFIKQGMSVT HSLGFSAAMM GGWIAGPLFL SYVSDRMGRR TAIMLFAAIC
ACLGAVYPFL TSATTIVLCG FLLVSAVAIF LTLGLGMTPE MFPTEYRFRG GGVAQMFGRL
GLIGSPFIVL ELFNNFGITG VVFAISGAYI VIAILIMVAG IETNQQSLEA LEPEEISDAE
GVLPQTAPRR