| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6813 |
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| Symbol | |
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| ID | 6248339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1433564 |
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| End bp | 1434784 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642598474 |
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| Product | porin |
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| Protein accession | YP_001862876 |
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| Protein GI | 186471558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0628209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAC GCTACCCAGA AGTTAAAGTC GCGGTCACGG CCGCGGCAAT GATGTTGACC
GGAACATGCG CCTTCGCGCA GAGTAGCGTG ACGCTGTACG GCATCGTTGA CGCCGGCTTA
GGTTATCAAT CGAGCTCGAC GTCGTTGGGT TCGACGTCGG GTGGTCACTC TGCGTTCAAG
ATGATTAACG GCGTATGGGC AGGTAGCCGC TTCGGCCTGA AGGGAGCAGA AGAACTTGGC
GGGGGAACGA AGGCGATTTT CACGCTGGAA GAGGGTTTCA ACAGTGCCAC GGGCGCGATG
GCAACGAACA ACCTGATGTT TAGCCGTCAG GCATTTGTTG GGTTGTCAAA CCCAACATTC
GGATCGTTCA CGGCCGGTCG TCAGTATGCC TCCTATTATC AGTTGCTCTC CGCTTACAGC
CCAACGACGT GGCTCACTGG CTATTTCGGC GCGCACCCTG GAGATCTGGA TGGCTTGGAT
ACTGGCTATC GCACCAATAA CACGCTGCTC TACATGTCGC CGGTGATATA CGGTTTCAAG
TTCAGCGGTT CATATTCGTT CGCGGGTGTG CCGGGGAGCG TGAATCAAGG TTCCAGCTGG
GCAGCGGCAA TCCAGTATGC TCAAGGGCCG GTTGGCTTGG CAGTGGGCTT CTCGCGCATC
AACAATTCAA CGCCAGGCGG TGGCGCATTC GGAGCAGACT CAGCAACATC AAACGCCGGT
GCACAAGCTG GTGTCTCGGC CGTAACCAAC GGATACCAGA CGGCGCAGGC TCAGCAGCGT
TTCGCGGTCG GCGCGGGCTA TACGTTTAAC AGCCAGTTTG ACGTCACCGC GACGTATACG
AACGTTCAAT ACATTCCGGG GATCAATTCG TTGTTTCGCA GCGAGCAGAT CTGGAATACG
GGCGGCATCG TACTGCATTG GAAGCCGTCT CCTACATGGG ACTTTGCGGG TGGGTACAGC
TACACGCGCG CGACCACGGC TAATGGCATC AGCAGCAGCG CACAGTATCA ACAGTTCAAC
CTGTCACAGT ACTACTCTCT GTCAAAACGT ACTGGTGTAT ACGTGCTGGA AGCTTATACG
CGCGCAAATG GTCAGACGCT CGCCACCAAT GGCAAGTCAA TCATTAACGC GACGGCAACG
ATCGGGGATG GCTTCAACAC CACACCTTCT TCATCGCGCA GCATGGTCGC GGTGGGTGCC
GGGGTCGTTC ATCGCTTTTG A
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| Protein sequence | MQRRYPEVKV AVTAAAMMLT GTCAFAQSSV TLYGIVDAGL GYQSSSTSLG STSGGHSAFK
MINGVWAGSR FGLKGAEELG GGTKAIFTLE EGFNSATGAM ATNNLMFSRQ AFVGLSNPTF
GSFTAGRQYA SYYQLLSAYS PTTWLTGYFG AHPGDLDGLD TGYRTNNTLL YMSPVIYGFK
FSGSYSFAGV PGSVNQGSSW AAAIQYAQGP VGLAVGFSRI NNSTPGGGAF GADSATSNAG
AQAGVSAVTN GYQTAQAQQR FAVGAGYTFN SQFDVTATYT NVQYIPGINS LFRSEQIWNT
GGIVLHWKPS PTWDFAGGYS YTRATTANGI SSSAQYQQFN LSQYYSLSKR TGVYVLEAYT
RANGQTLATN GKSIINATAT IGDGFNTTPS SSRSMVAVGA GVVHRF
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