Gene Bphy_6793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6793 
Symbol 
ID6248321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1410166 
End bp1410963 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID642598456 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001862858 
Protein GI186471540 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.215429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.323948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGTC TGCTTTGGCT CGGGATAGCA GCAGGCGCGG CGATGCTCCT CAGTGCCTGC 
GCACACATGA ATAGGACCGA CGACCCGATG CAAGAATCCC TCTCACTTAC CGACTTGAAG
TCAGTTTCCC CGGCCTTCGA ACGTTATACA ACCCGGACCG TCCTGGGCGA TCTCTGGCAC
CGACCGCAAC TGTCGCCGCG GGACCGCAGT ATTGTGACGC TCTCAGTGCT GATTGCACGG
GGCCAGGCTG TCGAAATGTC GTTCCATTTC CGGCTGGCGC TTGATAACGG CGTGGAGCCC
GCTGAGCTAT CCGAAATCAT CACCCATCTG GCGTTCTATT CCGGATGGGC GAACGCTACC
GCCGCTGCGG GCGTGGCAAA ACGCATCTTC GACGAGCGGC ATATCGCAGA AAACCAGCTA
CCCGCAGCAG ACGTGGCTTT GCTGCCGCTG AACGAAACAG CGGAACAGCA ACGCGCGCAG
ACGGTCCAGG AGAACTTTGG CACAGTCGCT CCGGGCGTCG TCCAGTACAC GACAGACGTT
CTGTTCCGCG ACCTCTGGTT GCGACCGGGC CTCGCACCTC GTGACCGGAG CCTGGTGACG
GTCAGCGCCC TCGTCGCGAA CGGCCAGGTT GCACAGATCA CATATCACCT GAACCGCGCG
ATGGACAACG GGCTCACGAA GGAAGAAGCG TCAGAAACGC TGACGCAACT CGCGTTTTAT
GCGGGCTGGC CAAACGTGTT TTCGGCGATG CCTGTATTCA AGGACGTGTT TTCGAAGCGT
GCGATGAGCC CGCAATGA
 
Protein sequence
MQRLLWLGIA AGAAMLLSAC AHMNRTDDPM QESLSLTDLK SVSPAFERYT TRTVLGDLWH 
RPQLSPRDRS IVTLSVLIAR GQAVEMSFHF RLALDNGVEP AELSEIITHL AFYSGWANAT
AAAGVAKRIF DERHIAENQL PAADVALLPL NETAEQQRAQ TVQENFGTVA PGVVQYTTDV
LFRDLWLRPG LAPRDRSLVT VSALVANGQV AQITYHLNRA MDNGLTKEEA SETLTQLAFY
AGWPNVFSAM PVFKDVFSKR AMSPQ