| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6791 |
|---|
| Symbol | |
|---|
| ID | 6248319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1409267 |
|---|
| End bp | 1409677 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642598454 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001862856 |
|---|
| Protein GI | 186471538 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.399896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGA AACGCGCAGG CTCCCAGCCA TCCATCAAGG GGCCGGATGA ATGGTTCACC
GGTATCGTGC GGATCGATCC GCTGAACGCT CCGCCGCCGC CCGCACGGGT CTCCTGCGCC
AGCGTAACGT TTGAGCCGGG CGCGCGCACG GCCTGGCATA CGCACCCGCT CTGCCAGACG
CTGCTGGTAA CAGCGGGATG CGGGTGGACG CAATGTGACG GCGAGCCGCG CGTCGAAATC
CGCGCGGGTG ATGTGATCTG GTGTCCGCCC GGCCACAAGC ATTGGCACGG TGCGACGTCG
ACCACCGCGA TGACCCATAT CGCTATCCAG GAAGCGCTCG ACGGCAAGAA CGTCAACTGG
CTGGAGAAGG TAACGGACGA GCAGTATCTC GGTAGCGCCG AGGACCAGTA A
|
|---|
| Protein sequence | MELKRAGSQP SIKGPDEWFT GIVRIDPLNA PPPPARVSCA SVTFEPGART AWHTHPLCQT
LLVTAGCGWT QCDGEPRVEI RAGDVIWCPP GHKHWHGATS TTAMTHIAIQ EALDGKNVNW
LEKVTDEQYL GSAEDQ
|
|---|
| |