| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6716 |
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| Symbol | |
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| ID | 6248249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1325207 |
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| End bp | 1325959 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642598384 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001862786 |
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| Protein GI | 186471468 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.649424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGT ACGATTTCAC GCAGCGCGCC GCCGTCGTGA CAGGCGGGGC GCAAGGCATC
GGGTATGCGG TCGCTGAGCG GCTGTTGCAG GGCCGCGCAC GCGTCGCGCT GTGGGATCGC
GACGAAGCGG CGCTTGCCGA AGCCAAGGCG AATCTCGCGC GCTTCGGCGA CGTTCAGAAC
GTGCTGGTCG ATCTCACGCG GCGCGACGAC GTGCAAGCGG CCACGCATGC AACTGTCGCG
CAGTTCGGCA CGATCGACAT TCTCGTGCAT AGCGCCGGCA TCGCGGGCGC GAATGCGCCC
GTCGCCGACT ATGCGCCCGA AGAATGGTCG CGTGTGATCG ACGTTGATCT GAACGCGGCC
TTCCACGTGA ACCAGGCCAT CGTGAAGACG ATGATCGCCT GCGGCTATGG GCGCATCGTG
AACATCGCGT CGATTGCCGG GAAGGAAGGC AATCCGAATG CGAGCGCGTA TAGCGCGGCG
AAGGCAGGCG TGATCGCGCT GACGAAAAGT CTCGGCAAGG AAACCGCGCA ACTCGACATC
GCCGTCAATG CAATTACGCC GGCCGCGGCG CGCACGCGCA TCTTCGAGCA GATGTCGCAG
CAGCATATCG ACTACATGCT GTCGAAGATC CCGCGTGGCC GCTTCGTCGA CGTGAAGGAA
ATCGCGGCGA TGGTCGCGTG GCTTGTGTCG GCGGAAAACT CCTTCACGAC GGGCGCGGTG
TTCGACCTGT CGGGCGGGCG CGCAACCTAC TGA
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| Protein sequence | MNQYDFTQRA AVVTGGAQGI GYAVAERLLQ GRARVALWDR DEAALAEAKA NLARFGDVQN
VLVDLTRRDD VQAATHATVA QFGTIDILVH SAGIAGANAP VADYAPEEWS RVIDVDLNAA
FHVNQAIVKT MIACGYGRIV NIASIAGKEG NPNASAYSAA KAGVIALTKS LGKETAQLDI
AVNAITPAAA RTRIFEQMSQ QHIDYMLSKI PRGRFVDVKE IAAMVAWLVS AENSFTTGAV
FDLSGGRATY
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