Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6706 |
Symbol | prpB |
ID | 6248240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | + |
Start bp | 1311444 |
End bp | 1312337 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642598375 |
Product | 2-methylisocitrate lyase |
Protein accession | YP_001862777 |
Protein GI | 186471459 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTCAA CCAGACAACC CATCAGCGCC GGCGCGGCAT TCCGCCAGGC CGTCGCAGAA GGACAACCGC TGCAGGTCGT CGGCGCAATC ACCGCCTACG CCGCGAAAAT GGCCGAAGCA GTCGGCTTCA AGGCCGTGTA CCTGTCGGGC GGCGGCGTCG CCGCGAACTC GCTCGGCATC CCCGATCTCG GCATCAGCAC AATGGACGAC GTGCTGATCG ACGCCCGACG CATCACCGAC GCCACCCACC TGCCGCTGCT CGTCGATATC GACACCGGCT GGGGCGGCGC CTTCAATATT GCGCGCACGG TCCGCTCGTT CATCAAGGCG GGTGTCGCTG CCGTTCACCT CGAAGACCAG GTGGGGCAGA AACGCTGCGG CCATCGTCCG AATAAGGAAG TGGTCGCGAC GCAAGAGATG GTGGATCGCG TGAAGGCTGC CGTCGACGCG CGCACCGACG ATCAGTTCGT CATCATGGCC CGCACCGACG CCGCCGCCGC CGAAGGACTC GACGCCGCGA TCGAGCGCGC CGTCGCCTAT GTCGAAGCCG GTGCCGACAT GATCTTCCCG GAAGCGATGC GAACACTCGA CGACTATCGC AAGTTCAAGG CCGCCGTGAA GGTGCCGATT CTCGCGAACC TGACCGAGTT CGGCACGACG CCATTCTTTA CGACGACGGA ACTGCGCGAC GCGAACGTCG ATATCGCGTT GTATTGCTGC GGGGCATATC GCGCGATGAA CGCGGCCGCC CTCAACTTCT ACGAAACGAC GATGCGCGAC GGCACTCAAA AGGCCGCGGT GCCGACGATG CAGACGCGCG AAGATCTCTA CAAATATCTT GGCTATCACG CGTACGAAGA CAAACTCGAC GCGCTGTTCG CCGCCAACAA GTAA
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Protein sequence | MNSTRQPISA GAAFRQAVAE GQPLQVVGAI TAYAAKMAEA VGFKAVYLSG GGVAANSLGI PDLGISTMDD VLIDARRITD ATHLPLLVDI DTGWGGAFNI ARTVRSFIKA GVAAVHLEDQ VGQKRCGHRP NKEVVATQEM VDRVKAAVDA RTDDQFVIMA RTDAAAAEGL DAAIERAVAY VEAGADMIFP EAMRTLDDYR KFKAAVKVPI LANLTEFGTT PFFTTTELRD ANVDIALYCC GAYRAMNAAA LNFYETTMRD GTQKAAVPTM QTREDLYKYL GYHAYEDKLD ALFAANK
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