Gene Bphy_6693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6693 
Symbol 
ID6248227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1292148 
End bp1294328 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content60% 
IMG OID642598362 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001862764 
Protein GI186471446 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.907714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGT CACAGTCAAA CCACGCCATG CGCGTTATTC CTCGTTTCCG TTGTAACCCA 
TCGATTCTCG GCGCTGCACT GCTCGCAAGC GTCGGGCTGG TGCTGTCGAC TGCCTCGTCG
GGCGTCCTTG CGCAGGACGC CGTGACCGAT AGCGCCACGC TGCCGACCGT CAGCGTGAAA
GCGACGGCGG ATGCCAACGC GGTGCAAGCC GGCAAAATCA ACGGCGGTGC ACTCGGCACG
CGCAAGCAGG TCGACACGCC GTTCTCGACG CACGTCGTGA CCAGCGAGGA AGCCAAGGAC
CTCTTTGCCA ATACGGCAAA TGACCTGTTC CAGTACGATC CTGCCGTCTC TATCACAAGC
ACGAACGCGA TCAGCGAGAA TTCGATGTTC AACGTTCGCG GCTTGCCGAT CGACACATTG
AACAGCATCA AGGTCGACGG ACAGAGCTTT CCGTCGTGGG ACACCGATCT CGCACTCGAA
CCGTTCGAGC AGGTCGAACT GCTGAAAGGG CTGTCCGGTT TCATGTACGG TTTCGGCTCG
CCTGGCGGCA TCGTGAACTA CGTGTTGAAG CGGCCGACGG ACACGCCTTA CCGCAGCGTC
TCGGTCGGAT ACCAGTCGGC AGGCGTCTTC AGCGAGAAGC TGGATGTCGG CGGCCGGTTC
GGCAAGGACG ACCGGTTCGG CTATCGCTTC AACCTCGTCA ACGAAGACGG CAACACGGCC
GAGGCGAATG GCCACCTGCA CCGCCAGGCC GCATCGGCTG CACTCGACTT TCGCATTACG
CCGGACCTGA CCTGGTCGGT CGATGCGTTC TATACGAAGC GCAAGCAGGA AGGCACGATA
TTCGGCCTGA TGTTCGGCCC GGACGCGGGT GGCATTCCGG ACGCGAGTCG CGTCACGCAT
GACCTGTCGC AGCCGCAGAA CTATTACCAG GTGGAAATGG CGTCGTTCGG TACGGGACTC
GATTACCGTC TGTCCGACAA CTGGCACGCC AGCGTGAAAT ACCGCTTTGC GAAGGAAAAC
CGTACGAACT CGGACAGCCT GCTGTACGTC TACGACAACG CGGGCAACTA CTCGAACACG
CTGTACGCGG CGATGACGCG ATACTTCTAC CAGAACGTCG ATGCGATGGT GGAAGGCAAG
TTCAACACGG GCAGCATCAA ACACGATGTC GTGCTGGGTG CAGGGTTCCA GTCGCAGGTC
ACCGAGTACG ACAACAGCGA AGGCTGGAAC GTCGGTTATC CGCTCGGCAT TGGCAACATC
TACAGCAGCA CGTATCTGAC GAACGCCGAT GTGCACATCG GCGAGAATCT CTACAGGCAA
TCGCGCACGA CGCAAGCCGC TGTGTACGCA AGCGACACCG TGCAATTCAC GTCGCGCATC
TCCGCGCTGC TCGGCTTGCG TTATACACAG TTCCATCAGT TCACGTACGA TCCCACGGGC
GCGACCACGG CGAACTACGC TGCGTCGCCG GTAACGCCGA CCGTGGCGCT GATGTACAAG
ACGGACCCGT ATTCGACGCT GTACATCAGC TACGTGCAAT CGCTGGAGCA AGGCGGCTCG
GCTGCGAACA CGAACGTCAA CTATCCGGCT ACGTTCGGCC CGCTGCGCAG CAAGCAGTAT
GAAATCGGCT TCAAGACAGA TCGAAGCAAG TGGGGCGCAA ATATCGCGTT GTTTCGCGTC
GATCAGGGCT ACTACTACAC GAACTCGGCT AACGTCTTCA CGCAGGACGG CACCAAGCGT
TACACGGGCG TCGATGCGAG TGGCTGGCTG CAACTGGCGA GCGACTGGCG CATGATGGGC
GGCGTCATGT GGCTCGATAC CAAGGCAGTC GACATCGACG ACCCGAGCAT CGAAGGCAAG
CGGGTCTATG GCGCGCCGCG CTGGACGCTG ACTGGCCGCG TCGAGTACAA CCCGTCGTAC
ATGCGCCGCC TGACGCTCGC ATTCGGTGGC CGCTACGTCA GCGATATGGC CGTCGATGCC
GCCAACACGC AGTTCGTGCC GGCCTACACG GTGTTCGATC TGAGCGGCAA GTACGACACG
CGCATTGCGG GCAAGGAAGT GACGTTCCGC GCGGGCATCA ACAACGTCTT TAATCGGCGC
TACTGGACGA CGGCATGGGG ATACTACGTC AGCCCGTCGG CTACGCGCAC GGCAGTGGCT
AGCGCAACGA TGCAGTTCTG A
 
Protein sequence
MKMSQSNHAM RVIPRFRCNP SILGAALLAS VGLVLSTASS GVLAQDAVTD SATLPTVSVK 
ATADANAVQA GKINGGALGT RKQVDTPFST HVVTSEEAKD LFANTANDLF QYDPAVSITS
TNAISENSMF NVRGLPIDTL NSIKVDGQSF PSWDTDLALE PFEQVELLKG LSGFMYGFGS
PGGIVNYVLK RPTDTPYRSV SVGYQSAGVF SEKLDVGGRF GKDDRFGYRF NLVNEDGNTA
EANGHLHRQA ASAALDFRIT PDLTWSVDAF YTKRKQEGTI FGLMFGPDAG GIPDASRVTH
DLSQPQNYYQ VEMASFGTGL DYRLSDNWHA SVKYRFAKEN RTNSDSLLYV YDNAGNYSNT
LYAAMTRYFY QNVDAMVEGK FNTGSIKHDV VLGAGFQSQV TEYDNSEGWN VGYPLGIGNI
YSSTYLTNAD VHIGENLYRQ SRTTQAAVYA SDTVQFTSRI SALLGLRYTQ FHQFTYDPTG
ATTANYAASP VTPTVALMYK TDPYSTLYIS YVQSLEQGGS AANTNVNYPA TFGPLRSKQY
EIGFKTDRSK WGANIALFRV DQGYYYTNSA NVFTQDGTKR YTGVDASGWL QLASDWRMMG
GVMWLDTKAV DIDDPSIEGK RVYGAPRWTL TGRVEYNPSY MRRLTLAFGG RYVSDMAVDA
ANTQFVPAYT VFDLSGKYDT RIAGKEVTFR AGINNVFNRR YWTTAWGYYV SPSATRTAVA
SATMQF