| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6689 |
|---|
| Symbol | |
|---|
| ID | 6248223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1288089 |
|---|
| End bp | 1289015 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642598358 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001862760 |
|---|
| Protein GI | 186471442 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.893822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAA ACTTCACAGT CAGGCAAGGC GCGCTCGATG GCGTGGAAGC GTTCTTGACC
GTGGCTCAAC ATCGCAGTTT CCGCCGTGCA GCCGCGGAAC TCGGCGTGAC AGCATCGGCC
ATCAGTCAGG CGATACGTGT GCTTGAAGCG CGTATCGGCG CTGCGCTCTT CATACGTACG
ACGCGAAGCG TGGGCCTGAC GGAAGCCGGT GAGCGATTTC TTTCGCGTGC AAAACCTGCG
TTCGAGGAGC TCGTGGCCGC CAGTGAGGTT GCGCGCGGAC TTGGGCAGCG GCCCGCAGGG
CTGTTGCGTC TGTCAGTGCC GCGTGCGGTG GTGCCTGTTC TGCTGGAGCC ATTGATCGCC
TCTTTCTGCC AGGCGTACCC CGAGGTCGAG GTAGAAATCG ATGCGACGGA AAAGCTGATT
GATATCGCTG CGGAAGGCTT CGACGCCGGC ATCCGTTTGG GCCAGTTCGT GGCCGCCGAC
ATGGTCGCCG TCGCATTGAC GCCCCCGCTG CACCTCGTTG TCGTCGGCAG TCCCGACTAC
TTCGCCACAC GCGGCAGGCC GCAACATCCT GACGATCTGC GCCAGCACGC ATGCTTGCGC
TGGCGCCGCT CCGGCGGCGC GCTCGCACCG TGGTCATTCA ACGAAAACGG TGAGGCAATC
GAGATCGCCG TGTCCGGACC GTTCATTGCC AACGACTTTC CCACCATGCT CGGCGCGGCA
GTCGAAGGCG TGGGCCTCGC CCAGTTGCCG GGGCCGATCG CCAGGGAAGC ATTGAGAGCG
AAAAAGCTGT TACAGGTGCT GGAGCCCTTC GCACCTGTCG TACCGGGCGT ATTTCTTTAC
TACCCGGACC GTCGGCAGAT CATGCCTAAG CTGCGCGCGT TCATCGATCA TGTGAAGAGC
CGTTCTGCGG CCAAAGGCAC AGAATGA
|
|---|
| Protein sequence | MKQNFTVRQG ALDGVEAFLT VAQHRSFRRA AAELGVTASA ISQAIRVLEA RIGAALFIRT
TRSVGLTEAG ERFLSRAKPA FEELVAASEV ARGLGQRPAG LLRLSVPRAV VPVLLEPLIA
SFCQAYPEVE VEIDATEKLI DIAAEGFDAG IRLGQFVAAD MVAVALTPPL HLVVVGSPDY
FATRGRPQHP DDLRQHACLR WRRSGGALAP WSFNENGEAI EIAVSGPFIA NDFPTMLGAA
VEGVGLAQLP GPIAREALRA KKLLQVLEPF APVVPGVFLY YPDRRQIMPK LRAFIDHVKS
RSAAKGTE
|
|---|
| |