| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6685 |
|---|
| Symbol | |
|---|
| ID | 6248219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | - |
|---|
| Start bp | 1284166 |
|---|
| End bp | 1285293 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642598354 |
|---|
| Product | putative serine-pyruvate aminotransferase |
|---|
| Protein accession | YP_001862756 |
|---|
| Protein GI | 186471438 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.161927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGGTT TACTTCCCGA TGTCGACCGC GAGGGGCTCC TCGAATATTC AGTCGTTTAC
ACCGACCGAT CGATCAATCA TATGTCGCAC CTTTTTCAAG GCGTCATGCG CGATATATCC
GACGCCCTGA AGAAAGTCTA CAACGCGAAG TCGGTCGCGA TCGTCCCCGG TAGCGGGACG
TTCGGTATGG AAGCGGTTGC CCGGCAGTTC GCGACGAACA GAAAATGTCT CGTCATCCGC
AACGGCTGGT TCAGCTACCG CTGGTCGCAG ATTTTCGACA TGGGAGGCAT TCCGTCCGAA
TCGATCGTGT TGAAGGCGCG CCCCGTCGAA GAAGGAAGAC AGGCCGCCTA TGCGCCGGCT
CCCATCGAAG AAGTGGTCGC CGCGATCAAG GAAAACAAAC CGGATCTGGT CTTTGCACCG
CATGTCGAAA CGGCATCGGG GATGATGCTG CCCGATGACT ACTTGCGCGA GGTCGCCGAC
GCCGTTCATG CCGTCGGCGG GATGTTTGTA CTGGATTGCA TCGCCTCCGG CACGATCTGG
GTGGACATGC AGGCCAGTGG CGTCGATATT CTGATCAGCG CACCGCAAAA AGGATGGAGC
GCGTCACCTT GCTGTGCGCT GGTTATGCTT AGCCCGCTCG CCCGTGAAAG GATCGACGCA
ACGACCAGCA CCAGTTTCTC TTGCGATCTG CGCAAATGGC TGCAGATTAT GGAAGCCTAC
GAAAACGGCG GGTTCGCGTA CCACGCGACG ATGCCCACTG ACAGTCTCGC GACGCTGCGC
GACGTCATGA TGGAAACCGA GGCATATGGC TTCGACAAAG TGAGAGTGGA ACAGCTCGAG
CTCGGCAAGC GCATTCGCGC ACTCTTGAAT GACGCAGGTT TCAAAAGCGT GGCGGCTGAA
GGTTTTCAGG CTCCGGGCGT CGTGGTCAGC TACACGGACG ACGACGGCAT CCGATCCGGC
AAGAAATTCG CGGATGCCGG CTTGCAGATC GCTCCCGGCG TTCCCCTTCA GGTTGACGAG
CCTGAAGATT TCAAGACCTT CCGCATTGGA CTGTTTGGCC TGGACAAGCT CCATGACGTC
GAAGGCTCGG TGGCCAGATT TGCCAAGGCG TTGAACAGTA TTCGCTAG
|
|---|
| Protein sequence | MPGLLPDVDR EGLLEYSVVY TDRSINHMSH LFQGVMRDIS DALKKVYNAK SVAIVPGSGT
FGMEAVARQF ATNRKCLVIR NGWFSYRWSQ IFDMGGIPSE SIVLKARPVE EGRQAAYAPA
PIEEVVAAIK ENKPDLVFAP HVETASGMML PDDYLREVAD AVHAVGGMFV LDCIASGTIW
VDMQASGVDI LISAPQKGWS ASPCCALVML SPLARERIDA TTSTSFSCDL RKWLQIMEAY
ENGGFAYHAT MPTDSLATLR DVMMETEAYG FDKVRVEQLE LGKRIRALLN DAGFKSVAAE
GFQAPGVVVS YTDDDGIRSG KKFADAGLQI APGVPLQVDE PEDFKTFRIG LFGLDKLHDV
EGSVARFAKA LNSIR
|
|---|
| |