Gene Bphy_6682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6682 
Symbol 
ID6248216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1279883 
End bp1280521 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID642598351 
Productisochorismatase hydrolase 
Protein accessionYP_001862753 
Protein GI186471435 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCC CCCTGGATCC AACTGGAGAA GACAACGAGA TCCGCGCCGC ATCCACGCGA 
CGCATGGCTT CGCCGATTCC GGCAATTGTG CCCGCGCGAA CCGCACTTAT CGTCATGCAC
TATCAGACCG ACATTCTCGG GCTGTTCCCA TCGGTCGCGC CAGCCTTGCT TGCCAATACG
CGCAAGCTCT GCGACGCCGC GCGGACCAAA GGCGTCGGCG TTTATTTCGC CAATCTCCGC
TTCAGTCCGG GCTACCCGGA AGTCAGTCCG TCGAACAAGA ACGGGCAAGG AATCAAGCAG
CTCGGTCTGT TCGTCGACGA TCAGACCGCG CCCGAATTGG GCCCGCGGGC TGGCGAACCG
GTCATCGTCG CGCACCGGGC CAGCGTGTTC TTCGGCACGG ATCTGCAGGC ACGCCTTCTC
GCACAAGGTG TCGATTCGCT GGTGATGGTC GGCATTGCAT CGACGGGCGT CGTGCTGTCG
TCGGTCGCGT ATGCGAGCGA CGCGGACTTC CGTCTGTTCA CGGTCAAGGA TTGCTGCTAT
GACCCGGATC AGGTGGTACA TGAACATCTG TTCTCCACCG CATTCGATTC GCGCACTACG
GTGCTCTCGC TCGCAGACGC CCTGCTGCTG CTCGCCTGA
 
Protein sequence
MEIPLDPTGE DNEIRAASTR RMASPIPAIV PARTALIVMH YQTDILGLFP SVAPALLANT 
RKLCDAARTK GVGVYFANLR FSPGYPEVSP SNKNGQGIKQ LGLFVDDQTA PELGPRAGEP
VIVAHRASVF FGTDLQARLL AQGVDSLVMV GIASTGVVLS SVAYASDADF RLFTVKDCCY
DPDQVVHEHL FSTAFDSRTT VLSLADALLL LA