Gene Bphy_6653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6653 
Symbol 
ID6248190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1248079 
End bp1249101 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content65% 
IMG OID642598325 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001862727 
Protein GI186471409 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTG CAGAACGCCG GCCGGTTCTC GATGTACGAG GCTTCTCATT GAAGTTTTCG 
AACTCGCCCG ATGTGCCCAA TGTCGTCGAC AACGTCTCGT TCCCGGTGCA TGCCGGCGAG
ACCTTGTGCA TGGTTGGCGA GTCGGGTTGC GGAAAGAGCG TCACGTCGCT GGCGCTGATG
GGACTGCTCG CAAGTCCGCC CGCGCGACGG GTCGGGGGCA CGGCGCATTT CGAAGGGCAG
GATCTGTTCG CACTGTCGGA ACGCGAACTG GCTGACATTC GCGGCAACCG CATGTCGATG
ATCTTTCAGG AGCCGATGAC CTCGCTCAAT CCCGCCTACA CGATCGGCGA GCAGATTGGG
GAGAGCATCC GGCGGCATCG CGGCATGCCG CGCGCGCAGG CGCGTGAAGA AGCGCTGAAG
ATGCTGCGCC TCGTCCATAT TCCCGCACCG GAAACGCGGC TCGATGCGTT TGCGCATCAA
CTGTCGGGCG GCATGCGTCA GCGCGTGATG ATCGCGATGG CGCTTGCGAA CAGCCCGCGT
CTGCTGATCG CCGACGAACC CACCACCGCG CTCGACGTGA CCATTCAGGC ACAGGTGCTG
TCGCTGGTGC GCACACTGCA GGCGGAAACG GGCACGGCGA TGCTGCTGAT CACGCACGAT
CTCGGCGTGG TCGCCGAAGT CGCGGATCAT GTCGCCGTGA TGTATGCGGG CAGGATCGTC
GAATACGGCA CGGTCGCCGA TCTGTTCGAC GATCCGCAGC ATCCGTACAC GATCGGCCTG
ATGGGCGCGA TCCCGTCCGT CGGCAAGCGC GAAGGTGCGC TCGCGACGAT CCGCGGCTCG
GTGCCATCGC CCGAACAGAT GCCGCGCGGC TGCCGTTTCG CGCCGCGCTG CCCGTTCGCG
AAGCAGCGCT GCATCGACGA GGCGCCGCCC GATCGCACGC TGTCGGGCGA GCATCGCGTC
GCGTGCTGGC TGGCGCCCGT CGAACAGCTC GCCGAGCCCA TGCAGCAGAA GGTCACGACA
TGA
 
Protein sequence
MTGAERRPVL DVRGFSLKFS NSPDVPNVVD NVSFPVHAGE TLCMVGESGC GKSVTSLALM 
GLLASPPARR VGGTAHFEGQ DLFALSEREL ADIRGNRMSM IFQEPMTSLN PAYTIGEQIG
ESIRRHRGMP RAQAREEALK MLRLVHIPAP ETRLDAFAHQ LSGGMRQRVM IAMALANSPR
LLIADEPTTA LDVTIQAQVL SLVRTLQAET GTAMLLITHD LGVVAEVADH VAVMYAGRIV
EYGTVADLFD DPQHPYTIGL MGAIPSVGKR EGALATIRGS VPSPEQMPRG CRFAPRCPFA
KQRCIDEAPP DRTLSGEHRV ACWLAPVEQL AEPMQQKVTT