| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6635 |
|---|
| Symbol | |
|---|
| ID | 6248172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1228180 |
|---|
| End bp | 1229922 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642598307 |
|---|
| Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001862709 |
|---|
| Protein GI | 186471391 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0244516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATG AGTCAACGCC GTCAGATGCA GCGCCTGCGG GCCAATCGCC TACTGACGCA
AACCCGCTCG AAGCCGACGC GCTGCTCGAG GACCCGAGCG TGCGCGATCA TCCGCGGCAT
CAGCAGATGT TCCCCGTCCT CACGGACGCC GAGATCGAGC GAATCAGGCG CTTCGGCACA
CCGTCGCGCT ACACGCGAGG CGCCCTGCTG TATCGCGCGG GAAGCCTGTG TCCCGGCGTG
TTCGTGCTGC TGTCCGGCCA GGTGCGGATC ATTGGCCGCG ACGGGCTCGG CCACGAACGG
ATCATTCACA CGTACACGAC GCGCGGCGAA TTCACGTCGG ACGTGACGCA ACTGTCGAAC
AAGCCCGCCG TCGTCGACGC GCATGTGACG GAAGATGTCG AGGCGATCCT GCTGCGTCCC
GAGGAACTCA GCGCGCTGAT GATCAGCGAA GCCGATCTCG GCGAAAAGAT CATGCGCGCG
CTGATCCTGC GGCGCGTACT CGTCATCGAA CGCGGGCATG GCGTGGTGCT TGTCGGCCCT
TCCGGCAACG CGCGGCTGCG CGCACTGGAA AACTTCCTGC GCCGCAACGC GTTTCCGAGC
ATGACGCTCG ACGCGGATAC GGACGCCGAG GCGATCGCGT TGCTGGAACG CCTGACGCCG
CAACCGGACG ACTTTCCACT CGTCGTCTGT CCGGACGGCA CGGTGCTGCG CAACCCCGAT
GAAGGGCAAC TCGCATCGTG CCTCGGGCTG ATCCCCGAAT TCGATCCCGC GCACGTCTAC
GATGTCGCGA TTGTCGGCGC CGGTCCCGCT GGACTCGCGG CCGCCGTGTA TGCGGCCTCG
GAGGGACTGT CCGTCGCCGC GCTCGATTGC CGCGCGCCGG GCGGACAGGC GGGCACCAGT
TCACGCATCG AAAACTATCT GGGATTTCCG ACGGGCATTA CGGGGCACGC ACTGGCGGGC
CGCGCGTTCG TGCAGGCGCA GAAGTTCGGC GCGCACATCG GCATTCCGTG CGAAGTCCGC
GCCCTGTATT GCGACAAGCT GCCGCCCGTC GTCGAACTCA CGGATGACCG GCGCATCACC
GCGCGCACGG TCGTGATCGC GACGGGCGCG GAATATCGCA GACCCGACGT CGAAGGGCTG
GAACGTTTCG AGGGCTCCGG CGTGTATTAC TGGGCCACGC CCATCGAGGC GCGTCTGTGC
CGCAAGGAAC CCGTGCTGCT GATCGGCGGA GGCAATTCTG CGGGACAGGC TGTCGTATTT
CTCGCGTCGC ACGCCGAGCA CGTGCACATG TTCATCCGCA GCGCAAGCCT CGAGCACAGC
ATGTCGCACT ATCTGATCGA GCGCATTCTG GCACTGCCGA ATGTGACGCT GCATACGCGA
GTCGAACTCA CCGCGCTCGA AGGCGATGCA CGCCTCGAGC GCGTGCGCTA TCGTGGCGCG
GGCGGCATCG AAGGAAGCAT GACGACACAT CATCTGTTCG TCTTCATCGG CGCGGAGCCG
AACACAAGCT GGCTCGCGAC ATGCGGCGTG GCGCTCGACG ACAGGAGCTT CGTCCTGACA
GGCCCCGACA TTCCCGGCGC CGGCCTGCAG TCGATGTCGC TGCAAACCAG CGTGCCGGGC
GTGTTCGCGA TCGGCGACGT GCGCTCCGGT TCGACCAAAC GCGTCGCGTC GGCGGTTGGC
GAAGGGGCGG CCGTGGTCGC GCAAATACAT CGGCTTCTCG CCGGCGCGCG GGCGGCCTGC
TAG
|
|---|
| Protein sequence | MSNESTPSDA APAGQSPTDA NPLEADALLE DPSVRDHPRH QQMFPVLTDA EIERIRRFGT
PSRYTRGALL YRAGSLCPGV FVLLSGQVRI IGRDGLGHER IIHTYTTRGE FTSDVTQLSN
KPAVVDAHVT EDVEAILLRP EELSALMISE ADLGEKIMRA LILRRVLVIE RGHGVVLVGP
SGNARLRALE NFLRRNAFPS MTLDADTDAE AIALLERLTP QPDDFPLVVC PDGTVLRNPD
EGQLASCLGL IPEFDPAHVY DVAIVGAGPA GLAAAVYAAS EGLSVAALDC RAPGGQAGTS
SRIENYLGFP TGITGHALAG RAFVQAQKFG AHIGIPCEVR ALYCDKLPPV VELTDDRRIT
ARTVVIATGA EYRRPDVEGL ERFEGSGVYY WATPIEARLC RKEPVLLIGG GNSAGQAVVF
LASHAEHVHM FIRSASLEHS MSHYLIERIL ALPNVTLHTR VELTALEGDA RLERVRYRGA
GGIEGSMTTH HLFVFIGAEP NTSWLATCGV ALDDRSFVLT GPDIPGAGLQ SMSLQTSVPG
VFAIGDVRSG STKRVASAVG EGAAVVAQIH RLLAGARAAC
|
|---|
| |