Gene Bphy_6618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6618 
Symbol 
ID6248155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1210108 
End bp1211256 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content61% 
IMG OID642598290 
Productextracellular ligand-binding receptor 
Protein accessionYP_001862692 
Protein GI186471374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.868668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC GTACATGGCT GTTAAGGTTG GCAGTTTGCG CTCTCGCAGC GCAGACTTCG 
TTTGCATTCG CCGCGGATCC GGAAACCGTC AAGATCGGTT TTGTCGGCCC GTTGACGGGA
CCCGTCGCGC GTGTCGGCAA GGACCTGCAA TACGGCGCGC AACTCGCGCT CGACGAGGAG
AACGCAAAGC AGCCGACCAT CGCGGGCAAG CCCGTGAAGT TCGTGCTCGA CGTGCAGGAC
GATCAGGCCG ACCCGCGCGT AGCGATCCAG GTCGCGCAAA AGCTGGTTGA CGACGGCGTG
GTCGGCGTCA TCGGCCATTA CAACTCCGGG TGCAGCATTC CTGCTTCGGC TGTGTATCAC
AACGCGAATG TCGCGATGAT CACGCCGGGT TCGACCAATC CGCAACTGAC GAAGCAGGGC
TTCAAGAACG TGTTCCGCAC GATGGGGCAT GATGGCATCG GCGGCGTGGT GGCCGGGCAC
TTCGTGGTCG AGCAGATGAA GGCGAAGCGG ATTGGCATTA TCGACGACCG CACCGCGTTC
GGTCAGGGTC TCGCCGATGC ATTCGAGAAA GGCGTGAAGG AAGCGAACGG CAATATCGTT
TCGCGTGAAT TCACCAACGA CAAGGCCGTC GATTTTCGCG CGATTCTGAC TTCGCTGAAG
AGCAAGAACG TCGATGTAAT TTTCTTCGGC GGGCTGGACG AGCAAGGCGC GATGCTGGTC
AAGCAGATGC GCTCGCTCGG CATGCAGGCG CAACTGTTCG GTGCGGGTGC ATTGAAGAGC
AATGCGTTCC TGCAGATTGC GGGTGCTTCC GGCGAGCGCA CGCAGGATCT CGAACCAGGG
CCGGCGCTCG ACAAGCTGCC CGCCGCGCAG GACTTCGGCA AGCGCTATAA GGCGCGTTTC
AACCAGGACG TCGAGCTGTA TGCGCCTTTT GCCTACGATG CCGCGCTCGC GATGATCAAG
GCGATTCACG ACGCGAATTC GCTCGACAGG CAGAAGATCG TCGAGAGTCT CGCGAAGGTT
TCGCTGACGG GCGTGACGGG CAAGATCACG TTCGATCCGT ACGGCGATCT GATCAAGCCG
CCTTATACGC TGTTCGAGGT GCAGCAGGGG CAGTGGAAGA GTGTGAGGAC GGTGGGGGGC
GGAGTGTGA
 
Protein sequence
MNRRTWLLRL AVCALAAQTS FAFAADPETV KIGFVGPLTG PVARVGKDLQ YGAQLALDEE 
NAKQPTIAGK PVKFVLDVQD DQADPRVAIQ VAQKLVDDGV VGVIGHYNSG CSIPASAVYH
NANVAMITPG STNPQLTKQG FKNVFRTMGH DGIGGVVAGH FVVEQMKAKR IGIIDDRTAF
GQGLADAFEK GVKEANGNIV SREFTNDKAV DFRAILTSLK SKNVDVIFFG GLDEQGAMLV
KQMRSLGMQA QLFGAGALKS NAFLQIAGAS GERTQDLEPG PALDKLPAAQ DFGKRYKARF
NQDVELYAPF AYDAALAMIK AIHDANSLDR QKIVESLAKV SLTGVTGKIT FDPYGDLIKP
PYTLFEVQQG QWKSVRTVGG GV