Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_6611 |
Symbol | |
ID | 6248148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 1201170 |
End bp | 1202609 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642598283 |
Product | major facilitator transporter |
Protein accession | YP_001862685 |
Protein GI | 186471367 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.410873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCA CTATCACCGC GCACGATTCG CCGTTTGCAT CAACCGAAGC GCATACCAAT TTGCGCGCCG CTGCTGCCCT GTCGGCGCGC ATGGACCGCT TGCCCGTCAC GCGTTATCTG TGGATGCTCG TTCTGTTGAT CTCGCTGGGC GGCTTCTTCG AGGTCTACGA TCTGATCTTC ACCGGCTACA TCGCGCCGGG CCTCGCGAAG AGCGGGATGC TCAAGACCAC GACGGAATCG TTCTTCGGCT TGCAGGGCAT AGCGGGATTC ATCGCTTCGA CGTTCGCGGG TCTGTTCGTC GGCACGTTCT GCTTCGGCTG GCTGCCCGAC CGCTTCGGGC GACGCAAGGT CTTCACTATC TCGCTGCTGT GGTATTCGAT CGGCTCGTTG ATCATGGCCT GTCAGACGTC GCCGGAAGGG CTGATTCTGT GGCGCTTCAT CACGGGTATC GGTGTAGGCA TCGAGATCGT GACGATCGAC AGCTACATCA CCGAACTCGT TCCGCAGCAT ATGCGCGGCC GCGCGATGGC GTTCAACCAG GCAGTGATGT TCGCAGCCGC TCCCGCAGCC GCGATTCTGT CGTACTGGCT CGTGCCGACG ACGTTCATGG GCATCGACGG CTGGCGCTGG GTCGTTCTGC TCGGCGCGGC GGGTGCGGTG GTCGTGTGGT TCATTCGCCT CGTCGTGCCC GAAAGCCCGC GTTGGCTCGC GAGTCATGGA CATGTCGAGC GCGGCGAACG TGTGGTCAGG AAGATGGAGG AGATGGCCGA GTTGCAAAGC GGCCGCGCGC TGCCCGCGCC GCTGCCCGCC GTCGAACAAC CGCTGCACCG CCGCGCGTCG CTCGCGGAGT TGTGGCAGGC GCCGTATCGC TCGCGTCTCG TCATGCTGAT CGTGTTCAAC TTTTGTCAGG CGATCGGCTA TTACGGTTTC GCGAACTGGG TGCCGACGCT GCTGATCGGC CAAGGCATCA CGGTGACGAA GAGCCTGCTG TATTCATTCA TCATCGCGAT TGCCCTGCCT TCAGGGCCAT TGCTCGCGAT GCTGTTCGCA GACAAGGTGC AGCGAAAATG GCTGATCGTC GGTTCCGCAT TGGCCGTGGT CGTGTTCGGG CTGATGTTCG GCCAGATGAA AACAGTGGTG CCGCTCATCG TGCTGGGCGT GCTCATCAGC CTCGCGGGAC AGACCATTTC CGTTTGCTAT CACGCTTACC AGGCCGAGCT CTTTCCGACG CGCATCCGTT GCCGCGCGAA TGGCATCGTA TATTCGGCGA GCCGCGTGGG CGCGATGATG TCGGGTTTCA TCATCGCCCA CTTGCTGCGC GAGTTCGGCG TGGCGGGCGT GTTTGCCGGC ATCACGGCGT GCATGCTCGT GGTGATGATT TCGATCGGCG GGTTCGGGCC GAAGACGAAC GGCGTGCGGC TCGAAGACTT GTGCCACTGA
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Protein sequence | MQRTITAHDS PFASTEAHTN LRAAAALSAR MDRLPVTRYL WMLVLLISLG GFFEVYDLIF TGYIAPGLAK SGMLKTTTES FFGLQGIAGF IASTFAGLFV GTFCFGWLPD RFGRRKVFTI SLLWYSIGSL IMACQTSPEG LILWRFITGI GVGIEIVTID SYITELVPQH MRGRAMAFNQ AVMFAAAPAA AILSYWLVPT TFMGIDGWRW VVLLGAAGAV VVWFIRLVVP ESPRWLASHG HVERGERVVR KMEEMAELQS GRALPAPLPA VEQPLHRRAS LAELWQAPYR SRLVMLIVFN FCQAIGYYGF ANWVPTLLIG QGITVTKSLL YSFIIAIALP SGPLLAMLFA DKVQRKWLIV GSALAVVVFG LMFGQMKTVV PLIVLGVLIS LAGQTISVCY HAYQAELFPT RIRCRANGIV YSASRVGAMM SGFIIAHLLR EFGVAGVFAG ITACMLVVMI SIGGFGPKTN GVRLEDLCH
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