Gene Bphy_6608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6608 
Symbol 
ID6248145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1197302 
End bp1198123 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content60% 
IMG OID642598280 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_001862682 
Protein GI186471364 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID[TIGR02312] 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTAA ATATGCGTAC CGCCAGTTTA TGGGTGAAGC TGAAGCTCGC CGAAGGGCAC 
ATCATCAAGG GTCGCAAGAT CGGCTTGACC TCGCGTGCAA TGCAACGTTC GTCGCAGATC
GACGAACCGG ACTATGCGCC GCTTCTCGAC AGCATGTTTA TCGAAAGCGG GCGGGACATA
CGGGCGGACC GCTTCATTGC GCCGCGAGTC GAAGTGGAGC TGGCGTTCAT TCTCGCAAAG
CCGCTCCGAG GTCCGGGCGT GACGCTTTTC GGTGTACTCG ATGCGACGGC TTATGTCTCT
CCCGCCGTCG AAATTATCGA CGCGCGCATT GAACAGTTCG ACCGCGAAAC GAAAGCACCG
CGCAAGGTCT TCGATACCAT TTCCGATTTC GCGGCCAATG CGGGCATTGT GATGGGTGGC
CGTCCCGTGC GTCCGATGGA TGTCGATCTG CGCTGGATCG GGGCGCTGCT GTACACGAAC
GGCGCCGTCG AAGAGAGCGG TCTCGCTGCC GCAGTGTTGA ACCATCCTGC GACGGGCGTC
GCGTGGCTCG CGAACAAGAT CGCGCCGTAT GACGAAGGGC TGAATGCCAA CGACGTCATA
CTCAGCGGCT CATTCACCGC ACCGGTTCCC GCGCGCAGGC GATACGTTTC ACGTCGACTA
CGGCCCGCTC GGCGGCATCG CGTTGAATTT CGTTTGACGG GCTCAGGGGC ATGTCCGTTT
CGGTGGCGCC CGGTGGCGCA CGAAGCGCTG TTCGACAACC GGTTTTCCCC ACTGCGTGCC
TTCGGCTTCT TCGGCAAGTT CGAAACCGAA CGCCTCATAT AG
 
Protein sequence
MLVNMRTASL WVKLKLAEGH IIKGRKIGLT SRAMQRSSQI DEPDYAPLLD SMFIESGRDI 
RADRFIAPRV EVELAFILAK PLRGPGVTLF GVLDATAYVS PAVEIIDARI EQFDRETKAP
RKVFDTISDF AANAGIVMGG RPVRPMDVDL RWIGALLYTN GAVEESGLAA AVLNHPATGV
AWLANKIAPY DEGLNANDVI LSGSFTAPVP ARRRYVSRRL RPARRHRVEF RLTGSGACPF
RWRPVAHEAL FDNRFSPLRA FGFFGKFETE RLI