| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6591 |
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| Symbol | |
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| ID | 6248128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1176881 |
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| End bp | 1178503 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642598263 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001862665 |
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| Protein GI | 186471347 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.476219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCG ATAAATCGCC TGAAGCAGTC GCCCATGCCG GCATCCGGCT CGAAGAGTTG
ACGCGCCGCG GTGCTTCGCG GCGCGACGTG CTGCGCGCGA TGGCGGCGGG CGGCTTGATG
TCGCTGACGG GCGCTGGCCT GCTGGCGACG AGCAGCGGCG CCGCCGCGCA ACAGCAGGCC
AAACCGAAGC AGGGTGGCAA GATTCGCGTC GCGACGCAGT CGGCGTCCGC CGCGGACACG
CTCGATCCCG CGAAGGGTGC GCTCGGCACC GACTACGTGC GCGCCAACAT GTTCTACAAC
GGCCTGACGG AACTCGACTC GCATCTCGGC GCGAAGATGG CGCTGGCGGA ATCGCTGGAC
ACGAAGGATG CGACCGTGTG GGTCGTCAAG CTGCGCAGCG GCGTGCAGTT CCATGACGGC
AAGTCGCTTA CGCCGCAAGA CGTGATCTAC TCGTTGATGC GCCACAAGGA TCCCGCTGTC
GGCTCGAAAG CGAAGACGCT CGCCGACCAG ATCAAGGATG CGAAAGCGAC AGGCCCGAAC
GAAGTGACGA TCACCCTCGA AGGCGCGAAC GCGGACTTGC CCGTGATTCT AGCCACGTCG
CACTTCCTGA TCATCAAGGA CGGCACGACC GACTTCAAGA CCGCCGTCGG CACGGGTCCG
TTCAAGCTCA GGGAATTTTC GCCGGGCGTG CGCACGGTCG GCGTGCGCAA CGAGAAGTAC
TGGAAGCCGG GCATGCCGCA TCTCGACGAA GTCGAGCTGA TCGGCATCGG CGACGAATCG
GCGCGCGTGA ATGCGCTCCT GTCCGGCGAC GTGCAGCTGA TCAATGCCGT GAGCCCGCGA
TCGACGGCGC GCATCAAGGG CACGCCCGGT TTCTCGGTGC TGGAGACGAA GACGGGTCAG
TACACCGACC TCATCATGCG CGACGAAGGC GGCATCACGG GCACGGCGGA TTTCCGCCGC
GGCCTGACGC ATCTGATGGA TCGCGAGCAG ATCCGACGCG CCGTGTTTCT CGGCTATGGC
GCGATCGGCA ACGACCAGCC GATCGATCCG ACCAACAAGT ACTACATGGC GGGCCTGCCG
CAACGCGCGT TCGACCCGGA GAAGGCAAAG TTCTACTTCC AGAAGGCCAA GCTTGGCAGC
GCGCCCGTGC AGCTGTACGC GTCGCCCGCC GCCGAAGGCT CCGTCGAAAT GGCCATGCTG
CTGCAACAGG TCGCGCCGCA AGCGGGCCTG AATCTGCAGG TGGTGCGCGT GCCGTCCGAC
GGCTACTGGT CGAACCACTG GATGAAGCAT CCGCTCGGCT ACGGCAATAT CAACGCTCGC
CCGAGCGCCG ACGTGCTGTT CACGCAGTTC TTCAAGTCCG ACGCGCCGTG GAACGAGGCG
AACTGGAAAA ACCCCAAGTT CGATCAGATG CTGGTCGCCG CGCGCGGCGA ACCGGACGAC
GCGAAGCGCA AGAAGATCTA CGGCGATATG CAGCAGCTCG TGCATGAAGA CGGCGGCATT
GGCATTCCGA TGTTCCAGAG TTCGCTCGAC GCGCATTCGT CGACGCTCAA AGGGCTCGGC
TCGATTCCGC TGGCCGGCCT GATGGGCTTC ATGTTCGCGG AGAACGTCTG GCTCGACGCC
TGA
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| Protein sequence | MSIDKSPEAV AHAGIRLEEL TRRGASRRDV LRAMAAGGLM SLTGAGLLAT SSGAAAQQQA
KPKQGGKIRV ATQSASAADT LDPAKGALGT DYVRANMFYN GLTELDSHLG AKMALAESLD
TKDATVWVVK LRSGVQFHDG KSLTPQDVIY SLMRHKDPAV GSKAKTLADQ IKDAKATGPN
EVTITLEGAN ADLPVILATS HFLIIKDGTT DFKTAVGTGP FKLREFSPGV RTVGVRNEKY
WKPGMPHLDE VELIGIGDES ARVNALLSGD VQLINAVSPR STARIKGTPG FSVLETKTGQ
YTDLIMRDEG GITGTADFRR GLTHLMDREQ IRRAVFLGYG AIGNDQPIDP TNKYYMAGLP
QRAFDPEKAK FYFQKAKLGS APVQLYASPA AEGSVEMAML LQQVAPQAGL NLQVVRVPSD
GYWSNHWMKH PLGYGNINAR PSADVLFTQF FKSDAPWNEA NWKNPKFDQM LVAARGEPDD
AKRKKIYGDM QQLVHEDGGI GIPMFQSSLD AHSSTLKGLG SIPLAGLMGF MFAENVWLDA
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